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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39481_c1_seq2
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		PREDICTED:_vam6/Vps39-like_protein_[Amyelois_transitella]
Ontology
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0008333 P endosome to lysosome transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030123 C AP-3 adaptor complex
GO:0030897 C HOPS complex
GO:0031902 C late endosome membrane
GO:0034058 P endosomal vesicle fusion
GO:0097576 P vacuole fusion
GO:1902774 P late endosome to lysosome transport
GO:1990126 P endocytic recycling
Transcript
Level		FPKM:12.13 TPM:9.58
ORF EntryO_BomoMG13541_5prime_partial:A_BomoMG_comp39481_c1_seq2
Sequence
(Nucleotide)
AAAAAAAAAAAAAAAAAACAAAAACAAAAAAGAGTCTATCAATAAACGAAGAGCAGTTCT
GAAATTCATTTCATATTCATTAGGTAAACGCCGGTAACATTCTATTTATCGCTTCTACAC
GAATAATGAACAATGTCACCGTTTGGATAACGCACGAACGCGCTCTGATGACCGAAGCGC
TTCTTGCAAACTTGACACACGTCGTAGTCGTTTATAACAACACTCTTTGATTCGTGGTAA
TGCTTCAGCTCTTGGACCTGCATATGTTCCGCATACAACAGTCCTTTGAGTATTTGCATT
CTCCGTTTCAACGTGAGTTGAGCCTCTAATGAGCTTTCCAGAAAGTGTTTCAATCGGCTA
AGCGGCACCGAATCTGGTAATACTGCGAGTGCTTTTAAGGGAGAGATCTTATCAGCGTGT
TTTTCCAATATATCCAGAGCCGTTTCTAGATCGGGCACCGATGTTTTCGGGTGTCTTGGT
ACGTTGGCGAGCGGTCCGCTAAGGGCGGCAATCTGATCGGGATTCATCAATATCTTCATG
AGGATAACGTAAACGTCTTGACTCTTGTCCTTGAGATTTTCACTCACGTTTTCACAGTAT
CGCATCGCTCTTTCCACGTCCCCCAAGATCAGCACATATATTGCGAGCGCCATTTCGTGT
CGTCCCAGCTTCCCCAGCACCACGGCGCGCTCCTCAAACAATCCATCGGTAGGGAAATGC
AGCAACACTCTCTCGGGCGTGTAGTGAGTCGATTTTTCTAGAAAAGCCAACAGCTTCGAC
TTCGTATGCAGCAATTCTTCTTCGGTAATATTCGCTTTTTTATTAATTATCTTCTCCCTG
TACATGTTTATTAGGGCGTCGTGGAACAATGGATTCGTATCGTTCCACGTGTGTATAATG
TGTTCCAGGTAAGGTATCACAAGCGATTCGTGTTCTCTCAGTAAGAAGTCAAGTACTTTC
GGACGGGGTAAGTTTTCGACTTCGATTTTATCTTCCGTGAATATCTTCAAGCCCTCCTCG
GGGTTCTCTTTCAGAATCCAATCGGAAAAATTGAATATTAAATTTATATGCTCGGCACCT
AACTGTTGCAAGTAGTTCTTAGTGCCCCGATATCCCTCGAGGCTGGAGTCCGGCTGCTTG
GCTTGTTCCCGCAACAGCTGAAGCGCCTTCGTGTGCTGCCCTTTAGTTTGGTACAATATT
ATCAGTTCGCTGTGCTTGCCGTGTTGCAGTAATGTCTTCTCGGCCTCCTCTAAACGACAA
TTGTTCAAGCGTAACAGGGGCGCGACAAATGCGTCGTTTGTCATTAAATAGCATTTCAGA
AGCGTTGTATCAATCAACTCCATCTGCTGAGC
(1352 bp)

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