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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39480_c0_seq5
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_RNA-binding_protein_NOB1_[Bombyx_mori]
Ontology
GO:0000469 P cleavage involved in rRNA processing
GO:0004521 F endoribonuclease activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0007601 P visual perception
GO:0030490 P maturation of SSU-rRNA
GO:0030688 C preribosome, small subunit precursor
GO:0042274 P ribosomal small subunit biogenesis
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:0.58 TPM:0.46
ORF EntryO_BomoMG13538_complete:A_BomoMG_comp39480_c0_seq5
Sequence
(Nucleotide)
AATTCACACGTGAGCTAAACAAGTTCGTTTTGCATAACGAATTATACACATGTAAAGTTA
ATATCGTGATTAGTGTTCAGCGCAATGCCGAAGTCTATCAAGCATCTGATTGTGGATACC
TCTGCATTCATAAGGGCGGCAAACCTTCAAGACATTGCTGAAAATGTTTATACTATACAA
GAGGTTATTGATGAAATAACTAATGATAGGCAAAGAAAAAAGCTCGTTGTCCTTCCATAC
GACTTAAAAGTCAAGGATGTCTTCGCAGATAACATAAAATTCATTACTGAATTCTCGAAG
AAAACAGGTGATTATTCTAGCCTCTCTGCTACAGATATTAAGGTTATGGCACTGACCTAC
CAGCTAGAGAAGGAGAAGGTTGGCGGTACGGAACATCTCAAAGATGAACCGACTATGCAA
AAATCTGTTAAAGTTACAGGATTGGCTGGGTTTAACCTTCATCCCAATTATGAAAATGCC
AATCAGGAAACAGGTGAGAAAGACTCTAATGCAAACAATAACAAAGAGACCAGTGAACCT
TTACAACAACCCATAGGAGAGACTGTGAATGTTGAAACTGGAGAGTCATTTGAAGTCAAA
CACCAACAAAACTGTCAAACAACAACAAATGAAACTGATGATGATAAACTGGCTGAAGAA
ATTTCAAAACAAATCAATGATATGGATTTGAAAGATGACAAAGTTGATGAGCTAATGGTT
AAAGTCTCTGATGAAGAGGCTACAGACAGCTATGATGATGATGATGATGAAGACGAGACA
GATAGCGATGGTGGAGAATGGATCACAACCAAAAATTTGGCTGAAAAACGAAAAGAGATG
GAACTTGGTGAATTCAAAGAAAAAGATGTTGAAGTTGCCTGCATCACTTCGGACTTTGCA
ATGCAAAATGTTTTAAAGCAGATAGGACTAAATGTTACATCAATAGATGGAAGAATTATA
AGACAATTACGTACATTTATTTTTCGTTGCACAACCTGTTTCAAAACAACTAGTGTAATG
ACAAAACTGTTCTGTCCTAAATGTGGTCATGCAACTTTAAAAAAAGTTGCAGTGAGTATT
GATGAAGATGGTAATCAAAGAATACATATAAATGGACGTAAACCTTTAACAGCAAGAGGA
AAAAGATTTAGTTTACCTACACCAAAAGGTGGTCAACATTTTCAATACCCAATTTTAACT
GAAGACCAGCATATACACAAAAGATTTGTTACCAAATTAGCAAGAAACAAAACAAATGCT
CTAGATCCTGATTATACTGCAGGATTTTCTCCATTCGCAATGAAAGATGTGAATTCCAAA
TCGGCTGTCTTGGGGGTGCGTGCCAACAATCAGGACATAAAATATTGGATGAAGCATTAT
TCTAAAGGAAAGAAGAAATAAATTGAAACAAACACATTCTTATTTATTAACTAACTAGGT
ACATAGACATAAATTTAACATTAATAAATGCTCATTCTTAAACATAACCAGAGAATAAAA
ATTCGCTATTATAACAGAGTAGTACCACGTGAATATTCGTTTTAATCCATATTTAGTATT
TCATCAAAGTATTTAAAAACAGAATCCATACACATGTATGATGTCATTTCATGTTTCTCA
TGACCTGCTGAAAGTCTGGTTATATCGAAATCAGGAGTTCTGAGAGGTGTATCCAGCGGT
GTCTGACTAGATATCCAATTCTTTGTAACCTGTAATATCGAGAAACCAATTAGGAAAAGT
TAAATTTCAACTGTGCATGCCTCCAGTTACATTCTTACCTGTTTCAAAAAGTTTGTAAGC
TTCTTATTAGAATAGGAATGTACAGAGTCAGTAAAAGCAATGGCCTTTACTCTGTCTTCA
AAGTCATTTTGCACCTCTTCTGCCAGAGAAACCGTGACAACCCCACCATAACTATGTGCT
ACAATGAGTATGGAACTTGCATTCGCATTGGATATGTAGTTCAGCCATGCGTAAAGGGCA
TGTTCCTCAGCGGTGCTACTGTTGAGAATGGTCTTTCCATCTGCTGTGTGATTGTCATTT
GTATTTAGTACCACTACTCCATAGTCTTTGGCCAAAGCCTTCTTGATATACGGAATCTGA
GATCCTTTGTCCAACGATTCATTGATTATGAGGGATCTAGCCCACTGACCAGCTCGCACA
ACGCCTGATCCGTGAATCAATATTAACAGAACATCTTTTTTATCATAATCTTTTGAAACA
AAAATAAATGTTCCATCATTTGAATCCTTTGGGATTGGTAACTTTTGCAATCCAATCTGA
GTCTGAAGAATATCATAAACATAATTGGTGATTGCTGAGCCAAGTTCTTCATAATGAGCT
TGGCATTCCTGGTGATCATTGCTCACAACAAATTGGAATGGTTCATCTGTTGGCTGTCCA
TCAGCTCCAATTTTTCTTACTTGACCATTTGAATCAAATATGTATCCCAGTTCCTTCATA
GTTTTCGTTCCCTCCATTTTGTAATGCACTTTATTAGCACTAGATGCAATCGACTTTCTG
TGAGGTCGCAGTCGTACTTTTGATATCGACGTGCGTACTGCGCGAATTACATTCATGAAA
GCTGAATTTATATGCATCTAGGTCTTGAAACTGAAAAATAAACAATCCCCAGGTCCCGGG
GTTGGA
(2646 bp)

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