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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39479_c0_seq1
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		PREDICTED:_exosome_complex_exonuclease_RRP44_[Bombyx_mori]
Ontology
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000176 C nuclear exosome (RNase complex)
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004527 F exonuclease activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006364 P rRNA processing
GO:0006402 P mRNA catabolic process
GO:0016020 C membrane
GO:0016075 P rRNA catabolic process
GO:0016787 F hydrolase activity
GO:0043488 P regulation of mRNA stability
GO:0043547 P positive regulation of GTPase activity
GO:0043928 P exonucleolytic catabolism of deadenylated mRNA
GO:0071034 P CUT catabolic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
Transcript
Level		FPKM:24.13 TPM:19.06
ORF EntryO_BomoMG13531_5prime_partial:A_BomoMG_comp39479_c0_seq1
Sequence
(Nucleotide)
ATTTTATTTCACACCTCATTTCCTTCTGGATTTCCTCTTTTTACTGGGTTTCGGGGCAGC
GGCGGCTGGGATCTCTCTCTTCTTGTGAGTCTTTTCCGAGCTTGGCGCTGCGGTGTCTGC
GACGTCGTCGACTTCCATGTTCCCCGCGTCCGGCACGTAGCTGAAGCCGGGCACGTGCGG
CTCGACCAGCTCGAACACGAGCTTCCTGTGCTGAAGATTCGAGCTGTCCAAGCTGAGACG
GACCGTTAGCTCGTCGAACGTTTTCAGCACGACGTCCCCGCATTTCTGAACGTGTTCCTC
TTCATTATACGTGAATTTTTCAGATGGTAAATACAGAGGTCCTTCCAGTCCATATTTAGG
TATCAAGACTTGTAGGGCGTTCCGCTTCACCGCCAGTACAACTGCAGACTCTATTTCTAC
TCTGTTCTTGAATAAAATGTGAGTGTTGAGCGCCACGGAGGCGCGGCCGGCGAGCTGCGC
GTGGCGGTGCCGGTAGTTGAGTGTGTCGGCGAGCGCGGCCTGGCGGCGCGCGTCCAGCAG
CGCGGCGTGCGG
(552 bp)

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