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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39436_c0_seq2
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_RNF13_isoform_X2_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005637 C nuclear inner membrane
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:0031902 C late endosome membrane
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
Transcript
Level		FPKM:21.58 TPM:17.05
ORF EntryO_BomoMG13347_complete:A_BomoMG_comp39436_c0_seq2
Sequence
(Nucleotide)
GTTCGATGTGTTTAATTGAACTTCAATTGAGTTTACATCATTCAAATAGATGAAGTTTTT
TTTTTTGTTAAGAATTTTTTTAAAAAAAGTTTTAAACTTTAAATGGCTTCTTGTAAATTT
GTAAAAATATCGCTGATACCAAATGGCTTTTCGCCTCTCGATATCATATTAGTGTTTCAA
AAAAAGATTTAATTAATAAATGAAAATTAGACCAAATTAATTGAAAATAACAAAAGTCCG
TGGCTTTCAATAGTGAATAATTTAAAACATTATTCTCGGCTTTTTATTCGAAATTTTTTA
CATAAATAATGTTCCGCACCCATCCTCAGCTCGTCCGGGGTTTTAGTTGATTTCAATCGT
AACAACCAGATATTATTTAAAAATACCTTAAATCCGTTCACCATTAGCATTTTAATAACC
ATTTTTTTCCATTAAACTTATACTTTCAAAGTTTTAGTACACAAAAAACTGTATTAACAA
CATTTGTTTCTGTAACATTTTACCATTAAATATAATAATAATCTGACCTTTTCACGAGAA
ACTACAAAAAAGATTTTACAAAAAAAAAAACAGATTCGCTTTGCGTATCATCTGTATTCA
AAATGGCGGATAACTTTACATGTAGTTCGTGAACTAAAAGCAACGTAAACTCCTTGTGAC
GTTTTGGTGATGGTTGGGGCGCGGCTGGGCGGGGGCGGTGCGGGGGGCGGGGGTCGTGCG
GCGCAGGGGTACTGGCTCATAAGTCGATGTACCGCGGCAGCGAGTGGTAGGCGGGAGCCG
GCAGCGCCGCCACCCCGATCTCCCCGCGCGAGGAGCCGTTGATGGAGTGGGGGGCGCGCT
CCTCCAGCAGGGGCTGCGCCTCGGTACTGCCGTTCAATTCGTCCTGATCAGACGTTTCTT
GACTATCTTCTAGTTCAGGAGGGACCTCTGCATCAGCACTATTCTGGTTATTTCGAGCCC
GCAACCTCGACATGAATCTCGCCGCTCGCACGAAAGGATTCTCGCGTTGCTCTTCAAATG
TTCCTCCTCCCTGGTCCCGCGGCTGCGGCAGGAGCGGCTCGGTGTCGGAGTCGGAGGAGG
AGGAGGAGCGGCGGGGGCGGGGCTCGCCGGCGGACACCACGCGGCGCTTGCACACCGGAC
ACACGCGCTTGTTCTGCGTCAGCCACGGGTCGATGCACGCGCTGTGGTAAGCGTGGGCGC
AGGGCAGCACGCGCAGGCGGTCCCCCTCCTGGTAGTCGTCAAGGCAGATGGCGCACGTGT
CGTACGGGTCGCCCTTGCTGAACTTGCACGTCGGTATCTTCGAAAGCGCACGATGCGGTA
AGCGGTGCCTTCTGGCTCTGCGTCTGTCTTTTATACATTTCACTATCATAAATATAAATA
TGACGAGTAGACAGAGCACGACCACTATTGCGAAGGGCAACAGCAGGTGCGTGTTGATGT
TGAACGGTAGGTCGCCGTTCACCATTATAAAGAAACCGGCATTATATTGGTATTCCGCTG
CCAGTATGTCGCCGGCCACGTCACTGACGAACACTGAAGGTATCACGATGCCCTCCGGAT
TCTTAGCCGACATTTTCTCCAAATCGCTCGAGTTCACGTTGTGCACGATCGCGCAATCGA
AGCCGGCCGCCTGCGCGTTGCGTATCTTCACTTCGAAGCTGCAGTTGTATCTGGCTACGA
GTACGATCCATTTCCCGGTAAAGCTGTCGACAACGGGCGGTTTATCCAGGGCCGTGCATC
CGTCAGCCGGGACGCCCTCGACCAGGAGTCCGCGCAGACCCTCCGGCGGCAGTTCCTCGC
CGAAACTAGCCGGGATGTCGCGGAATTCCTCCATTATCGCATGTGGTATCGTCTGCGTGT
AAACAATGATGTTACAGCAGACCGCCGTGAAGAAGCCGCATAGTACTATTATGACTCTGG
ACAGCATTTTAGTTCAGTTCATGTTATTCTTGCACCCCGAATTCGTCGATCATACTCTTA
TTGAAGTCTTCGGACGACGAGAGGACATTGTTCTAGGCACAAAAGGAAGTGTGTTGATAA
AATGTTTCGTAATCAAAAGCACACTTAGTATTCAATAAACTATCATTTCACAAATGTTCA
TTATAAATTAACTTATTTAAATTAATTTGATTTGTGTAAACAAGCCTCGTCCTCGAATCA
CGTGTGTAACGACAACAATAATATAGTCGTTCGCACAAAGCACAAGATGAAAATATTACA
TACAAACAGAAACTAAAAATACTTTATAATCCCGTCGCAAAATGTAAATTTAGAATTGCA
TTTGCGGAATATAACGAAAACTCGGTATTAAGAATTACAGCTTTATAACTAGCTTAACAA
CAAGAATAGGCTTATTGTTGATATGAAAGCCTAATTTCGATAATTAAACTACGACTGAAA
TGAATAACTTC
(2411 bp)

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