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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39431_c0_seq2
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		hypothetical_protein_RR48_09098_[Papilio_machaon]
Ontology
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006325 P chromatin organization
GO:0006334 P nucleosome assembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016589 C NURF complex
GO:0016922 F nuclear receptor binding
GO:0019233 P sensory perception of pain
GO:0030097 P hemopoiesis
GO:0035064 F methylated histone binding
GO:0035073 P pupariation
GO:0035076 P ecdysone receptor-mediated signaling pathway
GO:0042766 P nucleosome mobilization
GO:0045747 P positive regulation of Notch signaling pathway
GO:0045824 P negative regulation of innate immune response
GO:0046331 P lateral inhibition
GO:0046426 P negative regulation of receptor signaling pathway via JAK-STAT
GO:0046872 F metal ion binding
GO:0048515 P spermatid differentiation
GO:0048813 P dendrite morphogenesis
GO:0070577 F lysine-acetylated histone binding
GO:0070615 F ATP-dependent chromatin remodeler activity
Transcript
Level		FPKM:0.22 TPM:0.18
ORF EntryO_BomoMG13330_3prime_partial:A_BomoMG_comp39431_c0_seq2
Sequence
(Nucleotide)
TGAGTGAGGAGGTCTGAACACAAGCACCAAGACAATAATCCACAATTAAAAGTGGATGGA
AAAATTGATAACCTACCCACAATGGATAGTGATGTGTTAAATGAAGTGACTATTATGAGT
GAGGATTCTCAAGATAATAATGATATAGAACAGGAAGAGTCAACAGATGAGGATGATGAC
AAAAAGAGTATTAACCAGTTAATATGTAAATCTAAAAATATAATTAAAAAAAAATCAGAA
GAAGTTTCTGAACGATTAACAAGGCAGAAATCTAATCAAATGTCAAATGGAACATATTTA
TTCAAATTAGGAAATGAAAATAATTTTAAGACCTACATTAACCAGTATGCAAGCAATTCT
CTGGCTTTAAATAAACCTCAAAGAAACGAGGAAAGGGACAAAAAACGCTATATGTCACAT
AAGTTTTCTCTATCTTCTACTCAAGAGTTCAAATGGGTTGGTCTTCTGAATGCAACAAAA
CCATTCTTGGTTGCAACTTTGAGACAGACTCTGCTGCAGTTAGAATCTAATATTGTGCTA
CAGTTTATGCATCCAAATTGGTCTTTATTGAGAAAACCATGGGTACAAGCAGTCCAACTT
TGTCAAGCACCACGTGACTTCTCAAGGGCATTGTGTGTGCTACAGGCTTGCATTAAAAAT
GTTGTATGGGTACCGGCATGGCATGAACAGCTGGGTCATGTTAGGCTTATACGCACGACT
GCTGCTGAGCGTGAAGAACGAAAAAAACTAGATAAAAGAGAGAAAAAAGAGAGAGATGAA
GAAGAAGAGCGTTATCGCACCGCCTACAATTTCGTAAAATATTCTCTTGGTCTTCGTCAT
CAGGTTTGGAAGCAGAAAGGAGAAGAATACAGGATTCATGGTCAGTGGGGTTGGTTATGG
AATTCTGCAACTAGAAAATACAAAAAGCATAATTTTACTATCAAACCAACACTAAGCAAT
GGTCCAACCAAAATAGCAGTAAGAGTGAGAGAAGGCAATGTGACTAAAATTTTAGCCGTT
GAACCTAAAACATATGAATACTTAATTTCCAACGGAAATAATGAAAACAAAGATGTAACG
GAAAAATTACCACCATCTATGCGTAACCTTGTGATTCAAAAAGAAGACGATACCACTTTT
GAAGAGATAGATGTTGAAAAAGCATTAAGCTCTTCCATAAGAAGATATTATCCTAAAATT
GCTAAAAAATCTCGATTAGACGACTTCTTAGCACGACGAACTTATCTTAAATTTATGGAA
GAAAAGAAATTAGCCAATTTATTGCAAAATGTTAAAAAAGAGAATACTAATGAAAAAAAT
GAAGATGACAAAAATATTGATATCGAAAATGAAGAGCCAGAACATGACATTTCTACTATT
TGTGACTCAAGTCAATTTGTAAAACCAAACACAAAAAATGTTGATGTTCTTAGAGAAAAG
TATCAAGAACTATCACAAATAACAAAACACTACAAATGCTATTCTCAAACTTGTAATAAA
ATTGAAAATTTATCAAATTTTAACATTAATGCAAAGGTCGATTGTTACTCGCCTTTATGT
ATACTGAAGTTTAAACTTATAAACGAACTTGTAAAACTTTTAAAAAGTGATGTAATAAAT
TCTTCCAATATTTTTGAAAATTCTAAAGATTCTTCAAAATTCTCGATATTGGAACAATAT
CTCCTTGGTAAAAGCTCATCACAGCATAATTCTAATGATAAAATCTTAACAGATTTACTA
TCTGCTGTAGCATGTGCTCAGGAATATGATAACAAAAATAGCGACAGTTTTGTCAAGAGA
AAGTTAAGTAATAATGATTCTGATGTTAAGACAGAAAAAACGGATGTTTTTGAAGATATC
ATTAAAACTGAGAGTACCTTAGAAGAGTGTGCAGTGCCGGCTGTCGGAAATGAAATGGAT
ATTGATATTACATCTTGCAACAACGAAAATGAGATGGAAGTTGGACCATTAAAAGAGCTG
ACTGATAGTGAGCAACATAATGTTTCTGATACCGATAAGACGCGCCCTCCAATTCCGAAA
CTAAAAATATCTAGAGGAAAATCATCCAAATCGTCTAATACTACAAAAAATGAGACTAAA
GATTCTTCATATAATTGTTCTTTAGCACAAATAAAAAGAGAAGAAAAAGCGAAGTATCGT
GCATCTGTCAATAGAAGATTTGGTGGAGTAAAGACTTTTAAAAGAGAAGAGAAAAGCTTA
AAGTCCGAAAAAAAAGAGGGTGAAGTTGTCAGGATATATTCAGCCGAGTCTCCAAAGGGC
AAAATTTATTTGAAAAGGGTGCAGACCACTGCTGTTGAAAAGAAAAAGAAACGAACTCCA
GTAAAATACCCTTTGTGCTCTACATTTCACACTCGCAGTAAATCAAAAACAATAATGGTG
TTACCTCATCATGAGTTAAGGAAACTATGCAGGCAGGCGGGGCATAGTAGTATATCTGGT
TTCAGTCACAATGCAAAACCTAATCAAGGTGTTTGGCCTTATCCTTGCCCTAGACCATTA
TTTAAAACATGCTGGTTGTATAGGACGGTGAATTTGCAATGGCTCGCCAGTGCTGCTTTA
CAATTACGTATTATGTGGGCGTGTTTAAGATGGGATGATATGGCTGCTAAGCCAGCTACT
GCAGACGGTAAACACCAATTAACCACCGATACAGAAATAGTTTCTTTAGAATTGCTAAAA
CATCGTCATATGGGACAATTTTCTGAACACACTCAATATCTGCGAAGACGTGTCGTGATA
CCTCTGGAATTGCCCAAGACTGTACGAGAAGTAACATCTATTCGTAGCGGCTTAAGAAAA
AGAAAACGCGCAGAATCTCCTCAAAATACTGAACCACAGGTCTCTGAGGAGTGGGTGGAT
GAGGACAAATTGGAATTATGGGAAGTCCGTCAATATGGTGAAAAAAGCGATCGCGGAACT
CCTGTAACGCGCACATCAACTGGCAAGCTGCCTCACAGAAACATTGCACCTCTACCAAAT
GCGTCTGATCTCAAAGATAAAATGGAGCAACAACTACGTGAACAGCGAGCTGCACATCAG
CAGAAAAGAGCCTTAGAGATGTCCCAAGAAAAAGTAAAGTCTACTCCAAACCAAACAACT
GGAAAAAGTACTCTTACTTCTTTATTGTCAACAAATGCTACAACACCTACTGGACAAAAA
ACCGTTATAGGCACTAGAAGAATAATTATGACAAAAGGAGCTGATGGTTCTACACGAGTT
ATTAGTCAATCCATTTCGAGTAAAGCAGGACTGGATGGAAATAAATCAGCCACACCACCA
CCTAAAGATGGACCACAAAAAGTTCAAATTATTCGGGCTCCAGATGGTAAAATTACCGTA
AAAGGATTGCTTCCGGGACAACAACTGATACAAATGGCAGATGGTAAATTACATGTTGTC
ACGGCTGGACAACAAGGCATCACAGGTCAGTTAGTGGCAGCTTCTCCTCCAATAAAGAAT
ACGGAAATAACACAGAGTAAGTCGGAAAATAAAGTATCCAGTACGACAAAGAATTCCAAC
GAAGAGACGCGATCGACGTCTACGCCTCGCATTGCACCTTCGTCAACTCCGCAGCTAGTC
GTTCAGGGCGGGCGCCAGCTAGTCGTCCAACCGTCGCAGCAGATGGTCGTGCAGTCACCT
CAACAGGTGGTAGTTCAGTCTCCGCAACAGATGGTCGTCCAAGCGGGAATCCGCCCTAAC
ATCCAGCCGCGTGTACAGCCTCTCAACACTGTGGTAGTACAGGGACAGCTAATGCAGCGA
GCTGTTGCGCCCCGGACGCCAGTAGCGTCGCGCCCTCGTCCGGTCTCCACGCAACAAATA
GTCGTCAACAATCCTGCTTTGGTTCAACAAATAGCTGCCGGCAAAATACAGCTAGCTACT
GTCAACGGACAGCAGGTTCTGATTCGTCCGACTGGCAACAATCAAGCTCAAATAGTTGCA
CACATTGGTCAAAGTCCAGCGCCGCGCCAGCCGCCGCCCGTAGTCGCTCCGGCGCCGATT
CCTGTGGCGGCGCCAGTTTCGATTCCGGTCCCTGCGCCTCAACCCGTACCTGCACCTACA
CCACAACCTCTCACCGAAGATGAAATAGTTGAAAAACGACTATTGGTTGGTCAGCCACCC
GGGACTGTTATAAAAACTGTCACTGCTCAAGTCATGCAGACGAGTAGCGGACCTAGCATC
GTTCTGCAAGGTCTTCACGGCTATAATTTGAATCCCCAACAGCTCGCCCTCGTTCAGCAT
CAAGTGAAACAGCAACTCTTGAAAGCCCAAGAGTCAACGGGTAAGCAAGGAATGCTGGGT
CCTCGCAAGATGTATCTGGCGGTGCAGCCGGCCAACAGCGCGCCGCCGCCGCTAGCACCC
GTCGCCCATCCGCTCGCGCCGCAGGAAAATAATGATCCAAAACGACAGGCGCTTTTGAAT
GGCGAAGACAATGTAGCCGATGCTGCCGTTCACAAAGAAGCGACTCCATTTAAAGTAACA
AATTCG
(4506 bp)

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