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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39393_c0_seq1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_pre-mRNA-splicing_factor_SPF27_[Papilio_polytes]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005662 C DNA replication factor A complex
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030054 C cell junction
GO:0071011 C precatalytic spliceosome
GO:0071012 C catalytic step 1 spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:2.78 TPM:2.19
ORF EntryO_BomoMG13213_5prime_partial:A_BomoMG_comp39393_c0_seq1
Sequence
(Nucleotide)
GACCAAGGATATGACGATCCTGGAGTAAGAGAAGCTGCATTGGCCATGGTGGAAGAAGAG
TGCAGACGCTATAGACCCACAAAGAACTATCTTGAAAATGCAGGACCAGAACCAAGTTCT
GCATTTGAAACTCCTGCTTTACAACGAGAGATGGAAAGAGTGCAACAGAGATTGCCGATG
GAACCATTGTCTATGAAGAGGTATGAACTTCCACCCCCTCCAGTCGGAAGAATGAGTGAA
CCAAGTGCCTGGGCCGAGTCAGTTGACAACTCTCATGCACAGCTGTCACACCAAGCTATC
AGAGTTCTCAATTTAGAGTTGCAGTTAGAGTACGGTTCAGAAGCATGGAGATCATACCTC
AATACACTTCAAGCATTAGTCACAAGAGCTCAAAACGAACACAACCAGTTACGTAAACAA
ATAGGCTCTGTGAACTGGGAACGTAAACGCGTACAAACAGCAAGCGGTGCGAGGTTGCGG
GCATTGAGGCGACGGTGGGCGCAACTTGTCTCGGACAATTATAGACTTGAAAGAGCCCTA
CTTCACTTACAACAGGCAAAGGGAGAAGTACCAGTAGAAGAAGGAGAAGAAGCCGATTTG
GACATTGTAAAGTTACCTGAAAAACTCAATTCGGAAACAGAGAAGGAAGTGCAAAAGAAA
ATTGAAGATATGTTTGCGGATTAAAAGGAATTTTAGAACTTTGGAGTAGTGTTTTGGCCA
TTGATAGGTATGAAATGTAAATTAAATGTTCAATTTAAAGTTGTGGCTATAGAATCCTAC
TTATTGTTTCTAAATATGTATGTGTTATTATAAATTTAATAAACATTCTACTTTTTTAAA
TATGGCAATTGGCTTCTTGTGATTCGATTTTTATTAGTGCCGAGATTAA
(889 bp)

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