SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39357_c0_seq3
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_ataxin-1-like_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008022 F protein C-terminus binding
GO:0008150 P biological_process
GO:0008266 F poly(U) RNA binding
GO:0016363 C nuclear matrix
GO:0034046 F poly(G) binding
GO:0042272 C nuclear RNA export factor complex
GO:0042405 C nuclear inclusion body
GO:0042802 F identical protein binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0043621 F protein self-association
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0051168 P nuclear export
Transcript
Level		FPKM:4.40 TPM:3.48
ORF EntryO_BomoMG13061_3prime_partial:A_BomoMG_comp39357_c0_seq3
Sequence
(Nucleotide)
TCCTCGTCCCCGCGCCTCACGGCCACTCACTACGCACGGGGCTCCGCGTAGTGCCACTGC
CAGTCGCGCTGCGACCTGCGCCGACGTCGCACATCGTTCGCGTATTTCTGATCGTCACAT
CGACCCGTCATATCATTCATGCAGATCTCTGCCCGTTGATTTACCTGCTGTGACCGCAGC
GAGAAGACGCGCGACCCGCGAGTGACAAACAAAAGCGGCCGTCGCATCCGTGCACTTTTC
CTTCGGTATTTGAACGCACGGAACCAGTTAAGAGTGAACGATAGACTTTTCCTCGGATGA
GACCTCCGGCTTACCGCCGTTGTAGTGATCCACGGCCTGCGATGCTGCGCCCGTGACCGT
CTCAAGACAATACCACGAAACGTCATCAGATGATTTCGGCGAGCTTGCCCGGCGAGGCGC
TCGCCCAGCTGCAGCTCGGGCAGCTGAGCCATCAACTGTACCCTCCGCCGTCGGGCGGCA
TGACTCCAGAGTTCCTGGCGCCTCCTCCGCGCCCGTACGCGCGCTACCCCACGCGCCGCC
CCGCACCCCGGGAGCCCATGCCCGCACCCCCGCCGCCCAGCGCGCCATTCCCAACCGTAC
CGGCATACACACCCTTTCTACCGCACCATGCTTCCTATGCGTATTTGTACCGATCGAGGG
CGCAGCAGTCTCCGAACTACCAACACCGTCCGTATTCATCCGGTTTCGTGCCGCCATCGC
CCGCGCCGGCACCGCAGTCACCGCCGGTTTCTGCGCCCGCCCCCGCACCACCTCCGCGAG
AGGAATCACCCAGATCTCCAGAGCGCGCCGTTCCCGCTCCATATTTCTGTCGAGGTGCGC
TGATTCGACTTGAGGATGGTTCGCTGAGGCGTGTCGAGGAGATGCGCACGGAAGACTTTG
TTATGAGTGCAGATCGTATTGGTGAACTGGC
(931 bp)

- SilkBase 1999-2023 -