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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39336_c0_seq2
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		PREDICTED:_RING_finger_and_CHY_zinc_finger_domain-containing_protein_1_[Papilio_polytes]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0002039 F p53 binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005102 F signaling receptor binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016607 C nuclear speck
GO:0016874 F ligase activity
GO:0031398 P positive regulation of protein ubiquitination
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
Transcript
Level		FPKM:7.11 TPM:5.62
ORF EntryO_BomoMG12978_5prime_partial:A_BomoMG_comp39336_c0_seq2
Sequence
(Nucleotide)
GGGATTCCGAAAAGCAGTACCTAAGGAACTACATAATGTCGAAGGAAAAGTCAGAAAGTG
TAAACGGCGATAGTTCCACAGTTGCTGAACAAAACGGTGAAAAACGCATAGGCTGTGCTC
ATTACAAACGGCGAGCGAAGTTTGTGACTCCATGCTGTAACAAAGTGTACATCTGCCGTT
ACTGTCATGATGAAAACGAACAACACTATTTCAATAGGAAGACTGTTACAGAGCTGATAT
GCACCGAGTGCGACACAAGACAAAAGGTGCAGCCAGAATGCCAGAACTGTGGAGTTAGGT
TTGGAAAGTACACTTGTTTGATCTGCAACCTGTTTGATGATGAAGATAAGAAACAGTATC
ACTGCGACGGATGCGGCATATGTCGTGTAGGAGGCCGCGATAGGTTCTTCCATTGTGAAC
GCTGCAACATGTGCCTGCCTGTTCAGCTGCAAAGGGTCGGACATAGGTGCGTAGAGAACG
TGTCCCGTTCGAACTGCCCCGTGTGCCTGGAGGACATCCACACGTCCCGCATCCCGTGCC
ACATCCCGGACTGCGGCCACCTGCTGCACCGGCCCTGCTTCGAGCAGCTGCTGCACTCCG
GCCACTACGCGTGCCCCACGTGCCAGACGAGCATGATCGACATGTCGAATCTCTGGAATT
ATCTGGATTCCGAAGTAGCGGCCACACCGATGCCGTCCGAATACGCCGACTACAAGGCCA
CGATACTGTGCAAGGATTGTCATAAGCTGTCAACGGTGAAGTTTCACGTCGTAGGACTGA
AATGTCAACATTGCGGAGCCTACAACACGTGTCAGACGAACGGGTTCCATAAGGAGAGCG
GGAGTACTGAATCGGGAGACGCGTCAAGTTCATCGTCGGCGTCGTCAGCGTCGTCAGCGC
CGTCGCCCCGCGCTCCCCCGGCGCCGCACCACGACCTGCCCACCGCCAACCCGCTGGACG
AGCCGCCCCAGGCCTGACCCGCCCTCGCCACCCCCAGGACGATCCGTCCCAACCCACAAG
CAGCTCCTAGACGATGTTCATCTGCATTTTTGTATTCGTGTGCTATACGTGAACATATGA
GTCCTCGACCCGCCTGGTGCTAAGCGGTTACCATAGAAAGAAAGAAAGAAATCATTTATT
CGCCAAGCATAGTGAAAATGAGTTATTACATAAATTAAAAGCAGCGTGTACGCTTTGTGA
TTATTTGACATGCGAATTTTAGTGCAGTGCAAGATATTATAATATTATATAATTTACTAT
TCATTCATCCATAATTCAACTAATAATTAAAAAGTCAATTTATTTTCAATGTCGTCCCTA
AGAAAATCATTTATGTGATAATAATTTTCACTAATAAGATTGTCTTTTAGTTTTAAAATG
AAAATCCTCTAAGTCTAAGAGATTCAATGTCAAATTTACCTTTATATGTAGACAAGAACG
CGAAACTGGTTCGCGACAAATTTTTTATGTAGGTTTGTTCTAACATTCTATTCCTTACTA
CAAGCTCATGATATAGATTTTTAAATAAAGTTTATTACCTCCGAAAGCTGACAAACATTC
GGGCCGCTTGATTGTGGGTAGTCATTGTAGCTCATGGGCATCACCAATGGCAAGCCGCTG
TCCGCAACCCGATAACCCGTTAGCTGAATTAGTGTATTAGTTAAACCAAAGGAAACTGCA
AAAACAAACATATGTTTGTTTTTAATGCTCTAGATAAACCGATGAGCTCACAGCGTATCT
GGTATTAAGTGTTATGGGAGCTTGTAGTTGTTACGCACGTTGTAATTCCGAGGTGAGATA
CAGGCTCGATTGGCAACGACTGTGCCACCGTTAAGACCGGAACGCAAGACTGCTTCGCGA
CACAGCTAGAGACGATACTAGGACTACGATCAGTAAATCGATAATGACAATGGCATTGCT
GATGATTCTGCCGATGTTAAACAAACACAAGATATTGCATTTTATGTATTATTTAAAGTA
TTGACTTGCATTGGATGTCATCAAAAACCAACATACACATGAGGTAACTGGCCTCAAACG
ATGCCATTACTTTTCACACAGTGTAGACTTGCCGAAATAGTGTGTTGTCATCAGTAGCAT
AAAATTCGATTATTCTTTTGTAAAAATTGCTTGTACACACATTATTTTGAGATCCATTTC
AATTTGTATTTCAAATCAGCAGAAATAAAAAAATTTTGCTTTTGAATTGACTTTGTGTTT
ATATTGTGTGTTATATGTCTGGAATGAATAATGTGACATATCTGACTTCAAATGAGGCTA
AGTTTAAATTATAATATTTCAGTTATGATTACTCTTTTCCCTCTTTACTGGCCCCGCTAA
GACCCCACTGCACCAAGCTCCATTATGTAAACTTTTCTTGAACACTCTTCAAGGGGACTG
AAAGCTCATCTGCATATAAGAAATTGCATAAATACCTCACTTGTAATGGAATATTCTTTT
TCTACCTGTTACATAATTTCTTTGCAGTTAAAGTACAATAGAAATATAGGACATTATTAT
TGATACAAAAATGCTTTATTATTTATTGACTAATTTAGTGTTGTGATTAAAGTTGTTGAT
ATGAAAATATTTTAATGCAGCGGCTGTGTTATATTTGCTGTTCATGTAATTTATCAAAAT
GGTAAACTGAAATTAAATATTTAATTAAAGGATACCGATATCAGTTTACTTCAAGTTGCT
AGTTTTATATTAGTGCTTCAAGAACTATATGCCCGACATTTGTTGTACATATTTATTGGA
TACTCAAGAGATACATCAATAAATATATTAAATTCATTATTTATTTTTAAGAGCAACAGT
TTACCTATGTAATCTTAATTAAAAAGAATGTTATAATAGTGCTAGAAAAAATTTTCACCT
ATTTTATTATAATTTTTAATATGACTTTGGTCCAGTGTAGTTTGCAAGTTGCATTTCACG
CAGACATTGTTTTGTTGATTTTAATTCTATTACAGTAATGTATTCTGTATTTTCCTTGCA
AGATTTTATGATTTGGAAA
(3019 bp)

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