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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39336_c0_seq1
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		PREDICTED:_RING_finger_and_CHY_zinc_finger_domain-containing_protein_1_[Papilio_polytes]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0002039 F p53 binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005102 F signaling receptor binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016607 C nuclear speck
GO:0016874 F ligase activity
GO:0031398 P positive regulation of protein ubiquitination
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
Transcript
Level		FPKM:3.60 TPM:2.84
ORF EntryO_BomoMG12975_complete:A_BomoMG_comp39336_c0_seq1
Sequence
(Nucleotide)
GTCATATTTGATATTTGTAACATACCTACCTTTTTAGTAGCTCTTTCGCTCTTAATTCGT
TTGAAATACGGTTGTTTCACCGTAAAACATTAAAAAACTTATTTTCCTCCTGGAACGTGC
ATATTAACAACCTAAATGTCACGACAATCATGACAACATCGATACCAATGACCAAACCTA
AGTGATATTTAGGATCTCATTCAATGAAATTATTGCAAGAATCAATAGTGTATAACGTGT
GTAGACCTTGAGCTTTTATTAAAGGTAATTGGTTTGTATTCCAGACTACATAATGTCGAA
GGAAAAGTCAGAAAGTGTAAACGGCGATAGTTCCACAGTTGCTGAACAAAACGGTGAAAA
ACGCATAGGCTGTGCTCATTACAAACGGCGAGCGAAGTTTGTGACTCCATGCTGTAACAA
AGTGTACATCTGCCGTTACTGTCATGATGAAAACGAACAACACTATTTCAATAGGAAGAC
TGTTACAGAGCTGATATGCACCGAGTGCGACACAAGACAAAAGGTGCAGCCAGAATGCCA
GAACTGTGGAGTTAGGTTTGGAAAGTACACTTGTTTGATCTGCAACCTGTTTGATGATGA
AGATAAGAAACAGTATCACTGCGACGGATGCGGCATATGTCGTGTAGGAGGCCGCGATAG
GTTCTTCCATTGTGAACGCTGCAACATGTGCCTGCCTGTTCAGCTGCAAAGGGTCGGACA
TAGGTGCGTAGAGAACGTGTCCCGTTCGAACTGCCCCGTGTGCCTGGAGGACATCCACAC
GTCCCGCATCCCGTGCCACATCCCGGACTGCGGCCACCTGCTGCACCGGCCCTGCTTCGA
GCAGCTGCTGCACTCCGGCCACTACGCGTGCCCCACGTGCCAGACGAGCATGATCGACAT
GTCGAATCTCTGGAATTATCTGGATTCCGAAGTAGCGGCCACACCGATGCCGTCCGAATA
CGCCGACTACAAGGCCACGATACTGTGCAAGGATTGTCATAAGCTGTCAACGGTGAAGTT
TCACGTCGTAGGACTGAAATGTCAACATTGCGGAGCCTACAACACGTGTCAGACGAACGG
GTTCCATAAGGAGAGCGGGAGTACTGAATCGGGAGACGCGTCAAGTTCATCGTCGGCGTC
GTCAGCGTCGTCAGCGCCGTCGCCCCGCGCTCCCCCGGCGCCGCACCACGACCTGCCCAC
CGCCAACCCGCTGGACGAGCCGCCCCAGGCCTGACCCGCCCTCGCCACCCCCAGGACGAT
CCGTCCCAACCCACAAGCAGCTCCTAGACGATGTTCATCTGCATTTTTGTATTCGTGTGC
TATACGTGAACATATGAGTCCTCGACCCGCCTGGTGCTAAGCGGTTACCATAGAAAGAAA
GAAAGAAATCATTTATTCGCCAAGCATAGTGAAAATGAGTTATTACATAAATTAAAAGCA
GCGTGTACGCTTTGTGATTATTTGACATGCGAATTTTAGTGCAGTGCAAGATATTATAAT
ATTATATAATTTACTATTCATTCATCCATAATTCAACTAATAATTAAAAAGTCAATTTAT
TTTCAATGTCGTCCCTAAGAAAATCATTTATGTGATAATAATTTTCACTAATAAGATTGT
CTTTTAGTTTTAAAATGAAAATCCTCTAAGTCTAAGAGATTCAATGTCAAATTTACCTTT
ATATGTAGACAAGAACGCGAAACTGGTTCGCGACAAATTTTTTATGTAGGTTTGTTCTAA
CATTCTATTCCTTACTACAAGCTCATGATATAGATTTTTAAATAAAGTTTATTACCTCCG
AAAGCTGACAAACATTCGGGCCGCTTGATTGTGGGTAGTCATTGTAGCTCATGGGCATCA
CCAATGGCAAGCCGCTGTCCGCAACCCGATAACCCGTTAGCTGAATTAGTGTATTAGTTA
AACCAAAGGAAACTGCAAAAACAAACATATGTTTGTTTTTAATGCTCTAGATAAACCGAT
GAGCTCACAGCGTATCTGGTATTAAGTGTTATGGGAGCTTGTAGTTGTTACGCACGTTGT
AATTCCGAGGTGAGATACAGGCTCGATTGGCAACGACTGTGCCACCGTTAAGACCGGAAC
GCAAGACTGCTTCGCGACACAGCTAGAGACGATACTAGGACTACGATCAGTAAATCGATA
ATGACAATGGCATTGCTGATGATTCTGCCGATGTTAAACAAACACAAGATATTGCATTTT
ATGTATTATTTAAAGTATTGACTTGCATTGGATGTCATCAAAAACCAACATACACATGAG
GTAACTGGCCTCAAACGATGCCATTACTTTTCACACAGTGTAGACTTGCCGAAATAGTGT
GTTGTCATCAGTAGCATAAAATTCGATTATTCTTTTGTAAAAATTGCTTGTACACACATT
ATTTTGAGATCCATTTCAATTTGTATTTCAAATCAGCAGAAATAAAAAAATTTTGCTTTT
GAATTGACTTTGTGTTTATATTGTGTGTTATATGTCTGGAATGAATAATGTGACATATCT
GACTTCAAATGAGGCTAAGTTTAAATTATAATATTTCAGTTATGATTACTCTTTTCCCTC
TTTACTGGCCCCGCTAAGACCCCACTGCACCAAGCTCCATTATGTAAACTTTTCTTGAAC
ACTCTTCAAGGGGACTGAAAGCTCATCTGCATATAAGAAATTGCATAAATACCTCACTTG
TAATGGAATATTCTTTTTCTACCTGTTACATAATTTCTTTGCAGTTAAAGTACAATAGAA
ATATAGGACATTATTATTGATACAAAAATGCTTTATTATTTATTGACTAATTTAGTGTTG
TGATTAAAGTTGTTGATATGAAAATATTTTAATGCAGCGGCTGTGTTATATTTGCTGTTC
ATGTAATTTATCAAAATGGTAAACTGAAATTAAATATTTAATTAAAGGATACCGATATCA
GTTTACTTCAAGTTGCTAGTTTTATATTAGTGCTTCAAGAACTATATGCCCGACATTTGT
TGTACATATTTATTGGATACTCAAGAGATACATCAATAAATATATTAAATTCATTATTTA
TTTTTAAGAGCAACAGTTTACCTATGTAATCTTAATTAAAAAGAATGTTATAATAGTGCT
AGAAAAAATTTTCACCTATTTTATTATAATTTTTAATATGACTTTGGTCCAGTGTAGTTT
GCAAGTTGCATTTCACGCAGACATTGTTTTGTTGATTTTAATTCTATTACAGTAATGTAT
TCTGTATTTTCCTTGCAAGATTTTATGATTTGGAAA
(3276 bp)

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