SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39331_c2_seq3
Scaffold_idBomo_Chr2
NCBI non-redundant
(nr)		ATP-dependent_zinc_metalloprotease_YME1-like_[Papilio_machaon]
Ontology
GO:0000166 F nucleotide binding
GO:0004176 F ATP-dependent peptidase activity
GO:0004222 F metalloendopeptidase activity
GO:0005524 F ATP binding
GO:0005743 C mitochondrial inner membrane
GO:0006508 P proteolysis
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0007005 P mitochondrion organization
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:23.48 TPM:18.55
ORF EntryO_BomoMG12943_3prime_partial:A_BomoMG_comp39331_c2_seq3
Sequence
(Nucleotide)
CTACCTCCCAAGAAATTGACAAAATTTTCGAGTGCACTTCAAAAAAACTACAAAAACATA
CAATCTAGCTTCATGTAACATGTTCTCATTGAATTCTATAAACACCCAAAATCAGATATT
AATCAGTTTTAGTCAATTATCGTGTCGATACGGCAACCTTTTCAAACACAGAAAGCAAAA
TAGCTTAAAAGACAAACATGTGAAGGGGAAAGAAAGCGCCAGTGCTGCATGCGAGACTCA
AGTTTGCCGCGAGAGCTTAGAAGAGTGTTTGAAGAATTTCGATAAGAATGTACTAGCGGA
GATGCGAAGTGTCGACCTCCGATCGTTGGCCACGATCGCCGCGTCGTCTAGAAGGTCGCT
CAACGATTTTGGCGGTGTTACATCTTGTAGAAAAGTGTCTTACACTTCAAGTGAATCTTT
TGAGAAAAACAGGAATGGTTGGAGTGATACTCCTAGTGTTACAGTGGAGTTACGAGGGAA
AAACACACGATTTAACCTCTCCGATAACTTTATTCGCCTATTATGTCAAAACACAAAAAG
TACATTCAAGTACAACATTCAAGTAAGAGGATTTAAGACGGATCGAAGCATCAGTGCAGA
TCTGAAAAGAAATCCGAACCTGGTTAATAGACTACGGTTGGCTGCAACGAGTTCAACAGA
GAAGCACCCTCCGCTCAACCCTGAAGTTGCACCTCGATTGGACAAACTACTTAACGATGA
CGCGAACCATCTCACTCACCAGCAGAAGGACAAGATCAAGATTGCGTTCGCTGAAGGCTA
TTTAGCGGGGTCCCATCCCGAGAATGTACGCGGTACGAAAGCCTCCAAGTACCTGAAGCT
GGTCCAGCAACTCCTCACCATAGTTCTCTTTCTTGCAATCTTTGTGAGTTTGATGGCGTC
GGTCAGCGGAACTGTCTTCCGGATCCAGCTCGGGAACCAGGTGGAGGTGGACCCCGAAGA
TATCTCCGTTACCTTCGACGATGTCAAAGGCGCTGACGAAGCTAAACAAGAACTGCAGGA
AGTGGTGGAATTCCTCAAGTCCCCCGAGAAGTTTTCAACACTGGGTGGTAAACTACCCAA
GGGCGTGCTGCTCGTGGGCCCCCCCGGCACCGGCAAGACGCTACTGGCGCGGGCGGTGGC
CGGCGAGGCTCGGGTACCGTTCTTCCATGCGGCGGGACCGGAGTTCGACGAGATCCTGGT
GGGACAGGGGGCTCGCAGAGTCCGGGACTTGTTCAAGGCGGCCAAGGAGCGAGCGCCCTG
CGTCATCTTCATAGACGAGATAGACTCGGTGGGAGCCAAGCGCACCAACAGCGTGCTGCA
CCCCTACGCCAACCAGACGATAAACCAGCTCCTATCAGAGATGGACGGTTTCCATCAGAA
CGAAGGCGTGATCGTTCTGGGCGCCACCAACAGGAGGGATGACTTAGACCAGGCCTTGCT
CAGGCCAGGACGATTTGATGTTGAGGTGACGGTGCCGCTGCCGGACTACGTGGGGCGCGT
GGAGCTGGCGCGGCTGTACGTGTCGCGCGTGCGGGCGCACCCCGACGTGCAGCCCGAGGA
GCTGGCGCGCGCCACCACCGGCTTCACCGGCGCCGACCTCGAGAACATGGTCAACCAGGC
CGCGCTCAGGGCAGCTATAGAGGGCGCCAAGACGGTCACCATGAAGCACCTGGAGGATGC
CCGCGACAAGGTGCTGATGGGTCCCGAGCGCCGGGGGCGGCTCCCGGACGAGGAGGCCAA
CACCATCACCGCCTACCACGAGGGGGGCCATGCTGTTGTCGCTTATTTTACTAAGGACGC
CCATCCGCTGCACAAAGTGACCATCATCCCGCGCGGCCCGTCGCTGGGCCACACCGCCTA
CATACCCGCCAAGGAGAGGTACCACGAGACGAAGCAGCAGCTCCTAGCGATGATGGACAC
CATGATGGGGGGGCGGGCGGCGGAAGAACTCATCTTTGGACCGGAGAAGATCACCTCAGG
GGCGGCGTCGGACCTGAAGCAGGCGACGTCGCTGGCGCGGCACATGGTGCGGGAGTGGGG
CATGTCGGAGCGCGTGGGCCCGCGGGCGCTGGACCCGCCGGCGGCCCCCGCG
(2092 bp)

- SilkBase 1999-2023 -