SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39324_c0_seq1
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		groucho_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003674 F molecular_function
GO:0003682 F chromatin binding
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0016055 P Wnt signaling pathway
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0070491 F DNA-binding transcription factor binding
GO:1904837 P beta-catenin-TCF complex assembly
Transcript
Level		FPKM:8.38 TPM:6.62
ORF EntryO_BomoMG12915_complete:A_BomoMG_comp39324_c0_seq1
Sequence
(Nucleotide)
GTTTTGCGCATATATTTTTTTTTAATACGAGCATTTTACAACAATATTGAAACGAAATCA
TTTTGAGATCTGCTGCCAACATACACTACGGGCGCTCAACAAATAAACATAAATCGCGCA
CACTAATCTATATAAACATGTCGCATAAGTACATACAGGCTTCCCGATTTAATCTATACA
TACACTATAACTATGTATCACTTTACTCAACGTTCGCGGAACGTTCTCTCCTTCACTAGC
ACAGTCATATTGTTCGTCTGTTTGTCCGTTTCACTAGTAGATCACTTCGTAAACTGTGGC
CTTCTTATCGCCCGAACCCGTCACTATGTATTTGTCGTCCGATGAAATGTCACAGCTCAG
TACCGACGATGATTCTTTTGACTGGAATATGCTTGCGCCATACGGAGTGCGCCATGCGTT
AAGCAGGTTATCCTTCCCGGTGGAGACGAACCACTTCCCGCAGGACGCGAACCTGAGCGA
CAGGACGCACGACTCGTGCAAGTGCAACTGGTACTTGTCCGGCTTCACCGCGTGCAGAAC
CTCCACGTTGCTGTTCTCCATGCCGACCGCTAACCATTCGCCTGTAGGGCAATATCCTAA
TGAGAAAATTTGAGAGCTGAAATCGTGCTGTTGCAACTGTCTTCCTTCTCTCAAATCCCA
TGATCTGACTGTGTTATCAAGGCCGCCGGTCCATAGCTTCGTGCCGTCGGCTGAAATATC
TATACAGGATGCGCCGTCCGTGTGTCCTTGGAACTGTCGTACTAAAGTCTGATTGTGGAG
ATCCCACACTGCTATGTTGCCGTCAGAACAACAACTAAAGCAAACCTTAGAGTCGGGGCT
GATAGCAAGCGCGTAGCAAGCGGGCGCCGAGGACGTGAGCTCAGCTTTGATTCTGGGAGT
CGGCGAGGCGAGGTCCCATATAGACAAGTTGGACGCCTCCCCGCCCACGATCAGTGTCCG
CCCGTCGGGCAGCAGTTTGACTGACCGTATGTAGTTGTCCCTTTGCAAACAATCCAGTTG
ACTGACTGGGGCCTTGCTAGGTTGGCTGATGTCCCACACCTTAACGCAGCCTTTCCCTCC
CGTGTAGACGTACTTCGTGGGCGATGAAACAGTGACCGCGCAGACCACCTCACCATGAGC
TAGCGCGGAGACTTGTCTCGCATGCCTCGGTATACCAGGACCCATCAAGGCGTCTGGGGG
AAAAGGGACAGGCTGCATCTGTCCCTCGGCTGATACGTGGAATGAATATGCTCTGGAAGT
GTTAACAGGTTTTCCGCCAGGTATCGGCGCGAGACCAGCAGGGCCAATAGGGGGACGAAG
CGGCTCGTAAGGCAGCGCCCCCCTGGCCGAGTACCCCGCCAGGACGTACGCGTCGTGGGC
CCCGTTCCCGAGGTATGGGTACTGTAGTGCTGGAGGTTTGACTGCGGCCTTGAGTGGAGC
CCCTGCTGAGCCCGCACCGCTCGCGCCCGAAGTCGGCGTCACGGGCTTCGATATAGGCGT
GCTCGGTTTCTCGTCTAATTTCTTTGCTGATGGTGTTGACGCGTTGCTAGACGTCCCTGA
CCTAGGGCTGTGAGGAGGATGCTCTTTTTTTGGTTGGAGTTTATCGAGTCCGTTTTCTCG
TGGTGAAGGAGCGCCATTGTGTGGTGAAGTGGGTTCTTCGCTCGCGTCATCCACAACTAG
TTCGTGGCCCATGTCTTTCTCTTCTTTTTTTAATTTCTTGTGATCAGGTTCGGCAGGACT
CCGCGTCCTATATTTTTCCCTTTCGCCGGGCGATATGGAATTTCTATGTCGCTCCTCCGC
CGAACTGATACCGTTTCCCTTATCGTCCGATCGATGTAGTTCAGGTGGTTTCGCGAGTAC
GGAGAGTGGATGATGCGGTACTCCGAGGCCGAGTAGACCCGCTGGAGGTAGAGCGCCTTG
CCCCAGAAGAGGTAGAGGAGGCGCGCCGTGTGTAGGAAGATGCGCCGCGTGCATCTGTTG
CAGTAGCCGCGGCAAGTCTGGCCTTTGTTGGCCAATAATAGCATTGAGTTCAGTCATGGT
GACCTGTTTCGCCCTCTCGACTGCAGAGGCCACTTGCTGCTGATGCTCTTGCGACAGGAA
GGGTAATATTTGTGCTATTATCGCATTTAACCTTTTCGCTATCTCTGTCTGTTTGTGCAT
TTCCACGTTGAGTCCATACGACATTTCATAGTACATTACATAATGCCTTTGTATTTCTAT
TTTTTCACTAGCCAGTTTCTCGCATTCTAATTTTAAATTATGATATTGAGCTTGTAGAAA
ATTGAATTCCTCTTTAATCCTATCGCACGATTCACCCACTGTGAATTTGATCGGTTGCCC
GGGTTGTGGTGGACCCGGATGCCTGGCGGCCGCCACGGCTGCGGCGGCGGCGGCGGCGTT
CATAGCGCCCGCACTCGGATACATCCCAGCGTCAAACACTAACGGTCATGGTCTACACTG
AACGAATATAGGGCACAGCACACACTGCACAAGATCCACAGAACAACACTCCACGCGGTC
GGTCGCACGCGGTTCTCCGTCACAGCGTCAGACGGCGCACGTGTTAACTGCGCGAAGGCT
GCGAGCGGAC
(2590 bp)

- SilkBase 1999-2023 -