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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39277_c0_seq2
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_chitinase-3-like_protein_1_[Papilio_xuthus]
Ontology
GO:0000272 P polysaccharide catabolic process
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004568 F chitinase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005764 C lysosome
GO:0005975 P carbohydrate metabolic process
GO:0006030 P chitin metabolic process
GO:0006032 P chitin catabolic process
GO:0006955 P immune response
GO:0008061 F chitin binding
GO:0008152 P metabolic process
GO:0008843 F endochitinase activity
GO:0009617 P response to bacterium
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
Transcript
Level		FPKM:5.75 TPM:4.54
ORF EntryO_BomoMG12800_3prime_partial:A_BomoMG_comp39277_c0_seq2
Sequence
(Nucleotide)
CTACTATATTGTGTATTGACATTCCGAAAACAAAATTGAAAATGACAAACCTATGATCCT
ATGATCTCATCAATACAATATTAGATACTGTTAATTATTGTGAGTGTAACATATCCAATG
TACTATGAACAGCTGATAACATCTAAATAGAATTTACAATTTATTAGTTGCAACAAGACG
AATATAGCGATGCGTTTAGATTACGATGGAATTCTGACGAAAGCGAGCCTTTTCATAGTC
CTTGGAACTGCTGTATACATGTCGATGCTAACTCTGGTATATAGTGGTCAGCTGCATTCC
AAAAGTCAGGATAATGTGTTCTTCATCCCAGTTACATCAGACATCAAAAGTAATACAGTA
GTGTCTTGTTATTACAACACACCTGATAATGATGGCAAACAACTATTGCCAGCCAGTATT
GACCCTCACCTGTGCACACACATCAATGTTGCATTTGCAAGAGTCATCGACAAAAAGATA
CATCTAGATGAATATCAATACCAAACTATAACTGAATTGTGCAAACTCAAACAGGAAAAT
CCTGCCCTTAAAGTATTGATTTCAGTGGGAGGTGCTGGAGAAGCTTCTGGTTTTAGAGAC
ATGGTTGCCAATCATGCTTCTAGGAAAATTTTTATCAAATCAATCAAAACTATTCTAAGA
AATTACAAATTAGATGGAATAGATTTAGACTGGGAGTTTCCAGAAGTGCACAAGCTTTAT
AAAATGAAAGGAAGTCGCGAGAGGCAACACTTCTCCCAGTTACTGCGTGAAATCAGAATG
GAATATTTGAGGGAAAAGCGAGATTACCTGCTGACTGTAGCTGTTGCTGCTCCAGAGGCA
ATAGTTGATGTTTCCTACGATGTGCAGCAGATTAATAATTATGTAGACTATGTTAACATC
ATGACATATGACTACCACTATTATACTAAATACACTCCATTCACTGGCTTCAACTCCCCA
TTATTCTCAAGACCCTCGGAAAGTTTGTACATGGGCACACTTAATGTTAATTACACAGTC
AACATGTATTTAAATAAAGGATTGGATCGAGATAAGATAGTTGTTGGAATACCAACATAT
GGACATTCATTTACTCTAGTGAATGCAGACAACCCAAATATTGGCAGTCCAGCTTCAGGC
TACGGATCTCTAGGTTCACTAGGCTTTGTTAATTACCCAGATGTTTGCTTATTTGTAGCC
AACAGTAATGTTAGAGTGATATTTGATGATCACGCAAAAGTGCCTTACTTATATAAACAG
AAAGAATGGACCTCATTTGACTCAGCTCACAGTGTCATGGAGAAGGCAAAATATATAAAA
GACAATAGACTACGAGGTGCTATGGTGTATTCATTAAATGCTGATGACTATGAAGGAAAA
TGTACT
(1386 bp)

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