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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39253_c0_seq1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_leucine-rich_PPR_motif-containing_protein,_mitochondrial-like_[Amyelois_transitella]
Ontology
GO:0000794 C condensed nuclear chromosome
GO:0000961 P negative regulation of mitochondrial RNA catabolic process
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005637 C nuclear inner membrane
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0016020 C membrane
GO:0030529 C ribonucleoprotein complex
GO:0031625 F ubiquitin protein ligase binding
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048487 F beta-tubulin binding
GO:0051015 F actin filament binding
GO:0051028 P mRNA transport
GO:0070129 P regulation of mitochondrial translation
Transcript
Level		FPKM:0.97 TPM:0.76
ORF EntryO_BomoMG12712_complete:A_BomoMG_comp39253_c0_seq1
Sequence
(Nucleotide)
CAAATGAAGGATGTTTACATTTTAGCTTAAAATTGTATTTTTCAAAATTAAATATCACAT
GAACTGGACAACAAAAAACATTTATCACTGAATTTTCCCATTCATTTATTTATTTCATTT
ACTTCAAATTTTGCATCCATATTACATTGATTAACATTTCATATAGTATACCAAAATGAA
ATAAAATTAAACATTAAACCACTGTTCTTTTTTTCAATTAGCTATCCACTTCTTCCGATG
CCACTGTTGCCAGTGTCGAGTTTATGAAAATAGTTCTACTTTTTAGAGTGTGCGACTATC
AAATCACACAATAAGGATGTCTAAGAACGTGTTATTAAATTAACTAGTTTCATAACAATA
AGAATGAATTCATTCGGATATTAGCCTAGTGGAAAACATTCTACTAGGTCGGACTAAAAA
AAACGAGGCACACATGAAAACGGTTCGTGACGTCACTATGTAAGGTGCAGACATGCGAAA
TGGGGGGGAGGAAAAAGAAAGAAAAAAGATTTTCTTACTACGCACAGTAATTTCTTTGTA
TTTTTTTAAAATATATTTATTATTCTTTATAAATAATGTGTCGTTTTCGCTAAAACTATT
TTAAACATTCGTATTTACAAACGACATTAAGTACTCAAAACGCTTGTTACTTTGTCTTGT
TTATCTAACAGTAAGCTTAATTCTGACGGTACGGTTCTGTTGTTCGCTTTGAGCAACGAA
CAAATGTTTCGAACGAATTTCTGCGACGGCGTCACATCCGCTTCCTGCATTTTGGTCCAC
AGGGACAGCGCTTCTTGACAATTGTCGTCCCGTTGGTGCACGTCCAACATTAACTCATAT
ATGTCGTCGACGTTAACCCTCCTGACGTCGCGGGCGCATTCAGCGATACATTCTAAAGCT
TTCAACTTCTTCTCGTCAGCGAAGCGTTCGCAGCGACGGTACAACGCCTCCGGGTGAAAG
TTCACTTTTGGATCGAGGAAGAGCTTTCGAATCGTCTTCTTGTATCCCACTTCGGCTAGT
GCAGCTATTAGAGTTAGTTGGACATCGCTGGCTCCGTGCACCTTCCTGTCTGTATTCAGT
ATGGTCTGTGCCATTTTATTGAGTCTGCTATTACTCCTTTCGTGTATAATGAAATTGTCT
TCGGATCTTCCGTCACCCATCGCTTCCAAAATCTTACAAAGCAACTCGTGTTTCAACGGC
GTCATGCTGTACTGTTTGGCAAGACGAACGAATTCATTCAGGGCCTCTTCTAAGTTATCA
TTCTTCAAGTGCACGCGCACCAACGGACCGAGAAGCACGTTGTTGGGCTTGCAGTAACGC
AGCGCCGTCAGCGTCTCGAGCATCTTCCGTACGTCTTCGGGGGAGCCATTGGCCGCGGTC
GCGTCTAACAGACGCCAGCAATTCATTATTATACCGCGACCACCTATGATGCGTCTCTTC
TTTGACTGTTCGTTCAATAACTCCGTGGCTTGTTATCTCGAGCATCTTCCGTACGTCTTC
GGGGGAGCCATTGGCCGCGGTCGCGTCTAACAGACGCCAGCAATTCATTATTATACCGCG
ACCACCTATGATGCGTCTCTTCTTTGACTGTTCGTTCAATAACTCCGTGGCTTGTT
(1616 bp)

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