SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39228_c0_seq2
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_25_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0042981 P regulation of apoptotic process
GO:0044822 F RNA binding
Transcript
Level		FPKM:7.09 TPM:5.61
ORF EntryO_BomoMG12664_5prime_partial:A_BomoMG_comp39228_c0_seq2
Sequence
(Nucleotide)
CCCGCACACGCCGCCGAGCAGCGACGGCGGCACCACACCGCCGCGGCCCCCCTCGCCGGC
CAGCGGGGGGGCCGCCGGAGGGGACAGGACGCATAGTGGCGCTTCGGGCTCCAACTCTCC
GCTAACGATAAGCTTCCGAAACCGCCGCAGCCCCATCAGCGTGGACCGCACGCCCGACGG
AGCGGGCGCGGAGGGCCGAGTGCGCCGCCCGCACGCCGCCTTCGCGCAGGACGACGACGA
CGTGCCGCTCAAAGAGAAAAAAGACAAAGAAAAAGCGGACAAAGAAAAGAAGAAGAACAG
TGACGGAGACAAGGAGAACAAGAGCTCCGAGGAGAAACGGAAACACATCAAGAGTCTCAT
CGACAAGATCCCCACGCAGAAGGAACAACTGTTCCAGTACAAACTGGACGCCTCGCAGAT
CGATAACACGCTCATGGAGAAGAAGATACGTCCATGGATCAACAAGAAGATCATAGAGTA
CATCGGCGAGCCGGAGCCCACTCTCGTCGACTTCATCTGCAGCAAAGTGCTCGCCGGCTC
CGCGCCCCAGGGAGTGCTCGACGACGTGCAGATGGTGCTGGACGAGGAGGCGGAGGTGTT
CGTGGTGAAGATGTGGCGGCTGCTCATCTACGAGCTGGAGGCCAAGCGCGCCGGCCTGCA
CAAGTGAGCGACGCACAGACGGACTCTCTGTAAACTAATGTATGGTTATCTTTTGAAATA
AAACTATTTTTGTACCCGCGTGTTTATTGTTGCATTTTAAAGTCGCTGAATGAACACGAG
CAGCCGCGGACGCCGCGTCGATTATTATTATTATTACATGTAAATAGTAGATATTTAAAT
TAAATGTAACGAATTACAGTGCGTGAGATCGCAGCCGCCGCGCTCCGAGCTGATTATATA
TTTTTGTATATGGATTATGTACGCAACGAGCAGAGCAGCGACGGTGTGTCAGGAGTGACG
TCACGCGCCGACCGACCGCGCGCGCACTAGTGACGTCATACTACACCATTACTCCTCTTT
GTCAATTTGTTAGATTAACAGTTCAGTCAGAAGCAATATATATATGTACCCGGCACACGG
CTGCGACATGTATTTACGTTTGTTGAATTATAACTTGTACACGTTCGTTATGTAAATATC
TATAAGGGAGTGAGCGATTGTGTGAAGTGTGCGTGCGTGCGGGCGCGCACGCACGCACGC
ACGCACACACGCACGCACGCACGCACACGGGACGACGTTGTAATGTGTACTGAATGGTTT
TCGAGAATGTGTGTCTGTGTGTGACATGTTATTGTAACGTTAAGTTTAATATTATATACC
TCTTAGATAATAAAACTATTGTGGAAAAA
(1349 bp)

- SilkBase 1999-2023 -