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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39204_c0_seq3
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_vacuolar_protein_sorting-associated_protein_54_[Bombyx_mori]
Ontology
GO:0000938 C GARP complex
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006896 P Golgi to vacuole transport
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0007286 P spermatid development
GO:0007291 P sperm individualization
GO:0015031 P protein transport
GO:0019905 F syntaxin binding
GO:0030154 P cell differentiation
GO:0042147 P retrograde transport, endosome to Golgi
Transcript
Level		FPKM:3.99 TPM:3.15
ORF EntryO_BomoMG12599_5prime_partial:A_BomoMG_comp39204_c0_seq3
Sequence
(Nucleotide)
TAAATACATGTTAGATTAATAATTTAAACTTTAGATTAAATACCTATCAATCGCATCTCC
ATGTTCAGATTGGTTATCTATAGTACATAATATGATCGCCTCTAAAGATTCTAATAAAAA
ATGACAATAGCTTAATCATCGATTTTTTCAAAACCGATAATTTTTATTTATTTTGCTAAC
TAGTTCTGAAATAAAAATACCTTTTTGGTTTGTTTCTACAATTGCATTTGAGAACAATAT
TTCATCATCATAAAGTATTTTAAGTAGAAGTGATGACTTAATGTAATATTTATAAATAGA
TAGTTTTCTTTACATAAAATATTGGAAAAGTTAATTTAACCAAACGTCATATAGTATATT
GTCTTCTGCATCATTATCGTTTATAACTCTGAGTGTCTTTAGAGTTTGTAAGTAAAATGT
CAATTCAGAAGTCACTACACCATGTTGGGGGCTTCCATTAGCAACTATATTCATTTTAAT
TAGTTGTTCTCTTAATTTATCTTTAAAATTATCATGTACTCGTTTGTATATAAACTTTAT
TTGTTCAGGTGGCAAAATATCAATTAATGCTTCATGTAACTTCACTAAATGTTTTGAAAT
ATTGCGGAATGTTTGAGAAGGAACTGGGGGCTTTGCATCCCACCCTGTTAATTGAGAACA
TAACATATTACTTACAATTAAGCAAATCTTATTTTCTATTTCCTGTTTATGGCTAGCAAT
ATCACTCTCAATAGCAACAAAACCGCTCAATGATACCTCAGAAGAATGTATTTTCTCTAA
CAGCTGTTTTATCATAGGTAAAAACCATAATATAACCTGTAAAGATCGAGATACTAGAGC
TAAATTGGATGTAGAAATAGTTTTAAGTCCAGCACTTTGTATTGCCCCTGCACCGAGAAC
AAGTTGGCAGCACCGAGAATTAAACAATCTTAATAATTCTAACATACAATGAACTAAATA
CTGAACTATAATGGGAGATTGTCTGGTTGCATCACAGTATTCCAATAAAATTTTTATAAG
TAGTTGAACTGTCCCTACCAGAGCATAGCTTTCTTTGTTTATAAAAAGATATTTTCCGTC
TGGTTTCCCACTTTCATACAGTAAATTAGGAGGTATTTCTTGAATTTCACATATTTTTGT
GATTGCACTTTGCAATTCATATGGAACATCTGCAGTTTTCCATCGTTCAGCATTTAGAGA
AGCTGTTAATTGAGATCTGCGTTCAGTGTGAAGTGTCTGTATATACTTCATAGCAAAGCT
CCTTAGAGCCAAATTCATGGCATTACTACAATATCCGGTTACATCCTCACATTTGGTGCA
AAATTCTTTAATCAAATTTGATAGGAGAGATAACTGTGACATATCAGAACACACATAATC
TTTGTCTGTTTTAGTTACAATTAGGTTAGCACATCTTTCATTGCAGTAATCTGACAATGA
AACAATCATTTTTTTCAATTTGTCTTCAATAGATGTCAATTCTTCAGCTGACCAAATCTC
TTCATTATCACTCCCATTAACATCTTCCATTTGACTTACATCTATAATCAAATTTGTTAA
TGATAGTATTCTTTTAAATAACATAACTAAGTTTGGAGTCACTTTTTGCAAAAATAAAAT
GCCTTCGTTGCACAATAGCCACATGTTATCTGCATTTGATCCTCTTAAAACAATTTCAAA
ACAACCATCTCGCTGTGAA
(1699 bp)

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