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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39175_c0_seq4
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_sorting_nexin-13-like_isoform_X2_[Bombyx_mori]
Ontology
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008289 F lipid binding
GO:0009968 P negative regulation of signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031901 C early endosome membrane
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0035091 F phosphatidylinositol binding
GO:0043547 P positive regulation of GTPase activity
Transcript
Level		FPKM:3.52 TPM:2.78
ORF EntryO_BomoMG12527_5prime_partial:A_BomoMG_comp39175_c0_seq4
Sequence
(Nucleotide)
TTTTATGATAGCTCTGAAAATATTACAGGGAAAACATTAAAAGATATATTTTTTGAACTT
GAATGTGCTATAGAAAATAAACAAATGTGTAGAGATGTGTTCTGTGATGATACAGATAAA
GAATATGAGCTCCTTTGTGAAGTATCTGAAGCTATATTGTACTTGGTAGCTCCAGAAGAA
GCATGGGGATGTCATGCAATGAAGACGATTTTGATTGATCTTTTATCAGCCGTTGTTTTA
CGCCCCATAATCAGTTTAATGAGTGACCCTGATAATATCAATAGAATGATCATAAAATCT
TGTTGCAAAGATTCAATACTTCCATCAGAACTGTTTTTGATAGTCATAAGAAGCTGCGGG
GATGCTGAAGAGTTGGACGCAACTTTAGAATTAGTAGAAAAGGATATACAGAAACTACAT
TCTAAAGACAGCGCCGGCGAATGGGAGCTTCAGGATCGTCAGAAATTATCCTCGTTACAG
TACGTGACCAGGATAATACAGGCCAGAAGGGCTACGTTAGGTCCTCAAGAAGGTACTCTG
AATAATTTGAATACACAAAAAATGTCCGAGGAAATTGCGAGAACATTGAAGTTTTTGAGA
GCAACAGCAGCGTGGAAGTCTAACGCGCAATATTTACTAGAGATAGAGCTCCATGAATCA
GACGCTCCGCACACATCGAAAGAGGTCATAGACAACTTACGTTCGTCCGCACTCGAGTTG
TGCGATCTGTTTTTATCGCCGAACAAACCGCCGGTAATGGGCGTGCCAGAGAACTGTTAT
TCGGAACTCGTCCGTAAAATCACGACCGAAGGGGAGGAGTTTACGAACAATCCAGTTGTG
TGTTTTGACGAGCTGCAGAAATGCGTCTGCGACGCTTTAGAGGACGATCCTTCTTGGCAA
GCCGATTTTATGATGGAAACTGAGGATGGTACTTACAGAAGTAATAGTGACCTGAAAACC
GATCCAAAATCGGACAGTAAAAAGTATAGCGGTGACTTATTACACGTTCCCGGTACAAGA
CATAACCGTTCAAGGTCTGATATAGTTGGAAATTTGGCTGAAAGGATGAACAATGAGGGT
GCAGGACCCTCAAGTTTGACAGCTAACTCCAGCTTGTCGATGTCGCACACGGAAATCAGT
AGGAAAGCCAAAAATTTACTGTCTCCGCTATCGGCTTGTATCATAGAAACAGCACTAGTA
CAAGACAAAGGTCGAGCCTTTGGTATATACGCCATAGCCGTTACGAGACTTTCAGACAAC
GAGGTGTGGCACATATATAGGAGATACAGTGATTTCTATGACCTGCATTGCTCTATTAAA
GAAAAGTGGCCAGAACTTGGGAACGTTCCATTTCCGGCTAAAAAGACGTTTCAGAATACG
TCACGAGTAGTTTTGGAGAACAGGAAACGGATACTGAACGGCTACCTTCAGACTCTGGCC
AGCCTTTCGAGGGAGGCAAAGTACATGGCGCTGCTGTCGCGGGACTACTTGGGGGGATTC
CTCAGTCCGGTCAATCAAACCGAAAAACATAGTAATACGATCGATGCGCTTCTCGTGAAC
CCCTTGAGAGCCGGAATGAGGACATTGAAAAATATGCCGGATCAGTTCGTGAACACTGTC
GACGGAGTTATGGACGGAATCTCAAAGGTCTTCCAAGGAAAGAACACTGAAAATTACTAC
GACGGCATTAAAACCGGCAACGCAACCGACGGACAAGACGACGGCGATGAAAGCATGGCA
TTGAAGCTCTTGGAAGAAGTGCTTGGCATCCGAGGGTTGTGGCTCAGGCGTCGACTTCTT
GCGCCACTCAGAACCCTCATTGCGGATCGCGTGAACAGGAAAGTTTTAGAACTCGTATCG
TCGTTGACGTCGCCTCGGAACGTGGTTCAGTATTTGAAAACGTTTAAGCAATGGTTAACT
AGCCGACACAGCGCCAGTTACAGCGAAAGGGATGCGGCGACTAAAGCGAGAACTAGGGTT
GCCGCTAAAGTTGCATTGCTCTCGGCCTGCTCTGATGATCTCAAACATATAGTCGGTACT
GATTCAGCTCGAAGAGGTCTCCTCACAGTATTCGATTTATTCCAAATACAAGAAATCAAC
AGACGCTTAATATTCGTTTTGTTGGAAGTAACCCTAACCAATCTCTTTCCCGACAACAAC
ATACAAGGTCTGTTCAAGAAACTTTACACGAATTCTCCTAGAGTATCAGCGCCGAAGAAG
AATTCTGTTATATGAAAAATACTCAACATTTTGTGTTCTGATATGATTCAGATTTGGACT
ATTTAACTGCTGAATTGAAAAGAAAAGTTAAAAAAATTTATTCTAAATAAAAAAGGACAC
CCTTTATGCAAATATAGTCAAATAGAATATACAGGGTGTGAAAACGTCATTCCCGAAATC
GAAATGCGATTAAATGAAAAACTTAATGTGAAGGGACAAAAATATGATTTTACTACGCAA
TGCATAGTTACTTTTTTAGTCAGTTCATAAGACTCACATATAACCCGCAATGTAACATGC
ATCCCGTGATCACAGATTCCGCGCGTCACCTGATCTTATATTATATTGAGTGTATTATAA
AACATAATTACACTATATATAACTTGGTAGAACCACAATCCTTTGTATTCGTTTTAATGA
ATATTTCCTATAAATTCT
(2658 bp)

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