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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39159_c0_seq2
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		PREDICTED:_ankyrin_repeat_domain-containing_protein_17-like_[Bombyx_mori]
Ontology
GO:0000785 C chromatin
GO:0001955 P blood vessel maturation
GO:0002376 P immune system process
GO:0003676 F nucleic acid binding
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006275 P regulation of DNA replication
GO:0016020 C membrane
GO:0016032 P viral process
GO:0042742 P defense response to bacterium
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0044822 F RNA binding
GO:0045087 P innate immune response
GO:0045787 P positive regulation of cell cycle
GO:0051151 P negative regulation of smooth muscle cell differentiation
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
GO:1900245 P positive regulation of MDA-5 signaling pathway
GO:1900246 P positive regulation of RIG-I signaling pathway
Transcript
Level		FPKM:0.98 TPM:0.77
ORF EntryO_BomoMG12495_3prime_partial:A_BomoMG_comp39159_c0_seq2
Sequence
(Nucleotide)
CGGGCGCGTGCGTGAGCCCCAGCGCCGCCGCCTGCGCCGCGCTCAGCCCCGCGCCGTCCT
CCGCCGTCGTTGTTGTTGTCGTGCCTCTAGGAAGCATTACAGAATGTGGGAAGTCGAGGA
GCAGTTGCACGACGGCCGTGTGTCCGCCCTTGGCTGCCTCGATGAGCATGGTGGAGTTGT
CCTTGAGTTTTCGGAAGGGATCGGCGTCGCAGGCCAACAAGAACTTCACCACGTCCACGT
GTCCGCCCGCGCACGCCAGAGACAACGGCGTGTGGTCGCCGCTAGCCGTCATGCGGTTAA
CGTCCGCCCCCTTCGCGACTAGGAACTGCACGGTGCAGAGGTGTCCGGCGCGACACGCCT
TCATGAGGGGCGTGCGGCCGCCCTCGCTCTCGTGCTCCAGCGCGGCGCCGGCGCGCAGCA
GCAGCTCCGCCACGTCCGTGTGCCCGTTCTCGCAGGCGTACGTCAGCGCCGTGTCGCCCG
TCTGCGTCGTCGCGTGCACGTCCGCGCCCGCATTGATCAGATACCGTACTAGTTCTAGAT
GCCCTTCCTGCGAAGCCTCCATGAGCGGAGTGGAAGCGCCGAGCTCAGCGTCAGCGCCCG
CCTTGATGAGCGATTCCGCCACCTCGAGAAACCCTCCGCAGCAGGCGAGGGTCAGCGCAG
TCTCCTGCGTTTCCTCGGTCTGTGCATTTATCTGTGCACCTTGACCCAGCAGCAGCGCAA
CCATCTCCTCGTGACCTTCCCTAGCGGCCTCCATGAGCGGCGTGTAGCCCTCGTCATTGA
CCTCCTCGATGTTGGCGCCGCGTTCCAGCAGCAACATCGCCAGGTCCACGTGGCCTCCAC
ACGCCGCTAGTGTTAATGGCGACTCGAAACTATCCGTTGGCATGTTCACCTGCGCCCCGG
AGTCGAGCAGCAGCCTGGCGACCTCGACGTGTCCGTCCATGCTGGCCTCCATGAGCGCGG
TGTGCATCTCGTCCGTCTTGTGCTCGCGGTCCGCGCCCGCCGCCAGCAGGAACCGCACCA
TGTCCAGGTGACCCTTATAGCAGGCGAGCGTTAACGCGGATTCCTTGAACTCGTTAGAAT
GAGTGTTGATCCCTGCTCCGTGCTCCAACAGGATCTTTGCAACGCCGACATGGCCCGCCG
ACGCGGCCTCCATGAGCGGCGTGTGCCCGTTCTCGTTGTGGTCCTCGACGTTAGCCCCGT
TGTCGAGCAGCGCGCGCACGCAGTCCTCGTGTCCGCCCGCGCACGCGTACATGAGCGGCG
TGTTCCCGGAGCCGGACACCGCGTTCACGTCCGCGCCGTGCGCCAGCAGCAGCCGCACGA
TGTCCACGTGGCCGGCGCTCGCCGCCTCCATCAGCGGCGTGCAGTCGCCCTTGATACCCC
GGTCCTCGACGCTGGCGTGCATCGCCAAGAGGACCTGCGCGAGCTCGTAATATCCCGCTG
AGCAGGCGAGGGAGAGTAAGGGCTCGCCTTCCTCGGTCGTCTCGTGGACAGACCGCCCTT
CGGTGAGTAGCTTGCGGACAGTGCCCACGTCGCCGTCAGAGCACGCCTCGACAAGCGACG
GCGCTCCGTCCGCGCCCACAGACGAGGGGACCGCAGGCGTCGAGCCCGTCGCAGTCACCC
CGCACGGCTGACTGAAATTCTTCTCTTGGTGATGATGCCTGTGGTGGGGCGCGGGCTGGT
CGCTCCGCATTCTCGTTAGGGCGGCGGCCGCCTCGTCTAGTGCGCAAGAAACTGAAGAGG
TGAGCCTACGAAGGACCTCCGGGTCGGCCAAGTGTTTGCCTTCGCCTGACAGTTTACCAA
TACCTCAGACACGGAGTCATCCTCACTTTCCGAAGAGTCTGTCATATATTTGGCAGGAGC
TCCTGAATACGTTTCAGTTTCAGATTTGGCCGGACTTGAAGCCGAACTCTGTGGAGTAGA
CGTTTTTACCACATCAAGTTGCACATTCACCTTATCGATATTTCGGTTTTCAGACTGTCC
AACATTCTGCATCTTTGTCCTAATCCAATATAACTTAAATAGTCTTTTAGTATCGACACT
TTTAATATGAAATTAACACGTTATTTTATTAGCAAACAAAATTTATTTCGTCACTTAGCC
AGGTTGAAACCCGCCATGTCTACTACATACTATGGCG
(2137 bp)

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