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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39122_c0_seq1
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_3-like_[Papilio_machaon]
Ontology
GO:0000278 P mitotic cell cycle
GO:0000790 C chromatin
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0031647 P regulation of protein stability
GO:0036459 F thiol-dependent deubiquitinase
GO:0042393 F histone binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.89 TPM:2.28
ORF EntryO_BomoMG12417_5prime_partial:A_BomoMG_comp39122_c0_seq1
Sequence
(Nucleotide)
AAAATGATGAAAAACAAAACAGTAGAGAAAAGCAGGAAGATAGCAGACAAGATGAAGATG
ACTGTGATGCCAATATACCTGGTTTGGTCACTGCTCCAGATGATATAGTGCTCAATGTTA
TTGAAGGAGATATAGCAGTGCAACCAACAAGCTCTTCTTTAGATCCTCACAGTACAGAAA
TTGAAAACTGTGATAGTAAACTTGATAAATGTATTAAGGGGACTGAAGAATCTATACGAA
GTCTTAGACCAAGATCGAGGAAGAGAACTCATTCCGAGGACAGTAGCTCAACTGAAAACT
CATTACAGATAAACAGAAAAGATAAAAAACGATCGCCTTCTAATGGAAAGCTTCAGAGAG
AAAAAAAAAGTTGTAGGATTAAAGAATTTAGGCAACACATGTTTCATGAATGCAGTTCTT
CAGAGTCTGAACAATATACAAGAATTTAGTTGTTATTTCAATCAATTACCTTCTTTGGAG
ATGAAGGCAAATGGCAGGAAGGTGTATCATTCAAGGAGTTATACACGACAGGAGATGAAT
GATGTTGTAATGGCTGAAGAACTCCGTAAGGTGTTGATAAATCTCAATACTGGTGGTTGC
GGTTCGAAAGGTGCTATTTCACCGGAGTGCTTGTTCCTTGTGATTTGGAAGGTGGTACCG
AGGTTTAGGGGCTATCAGCAGCAGGACGCACATGAGTTTCTCAGATACATGCTAGACAGA
TTACACACGGAGCTGTTGCAACTGCTGCCCCCCGAGAAGCCGGAGCCCGGGTTCGTGGCG
CGGCCTCCGTCGGCGTCCATCGTCACCGCTGTGTTCGGGGGAACATTGCAGAGCGAGGTT
CGTTGCTTGGCGTGCGGCACGGAAAGCAAGAAGTACGACCCTTTCTTAGATCTCTCACTG
GAATTACCAGAAGTCGGAAGAAATGATACGCCCGTCGCTCTTTCGGATTGTCTCGCCAGC
TTTGTACAGGTCGAGGAGTTGGCCGACACGGAGCGTTACTTCTGCAGCAGCTGCAAATGT
AAGCAGAAGTCCACTAAGCAGTTCTGGATTCGGAGGTTGCCGAACGTTTTGTGTCTACAT
TTGAAAAGGTTTCGGTGGCACAATTATTTCAGGACCAAGGTGGACACTTCGATCTCGTTC
CCGCTGCGCGCGCTGGACGTGTCCCGCTTCGTGCGCGACGTGCGGCGCGCCGAGCACGAC
GCGCTGCTGTACGACCTCGCCGCCGTCATCGTGCACCACGGCTCCGGGGCCGGGTCTGGT
CACTACACCGCGTTCGCTATAAACGAGGAGCAGTGGTTCCACTTCAACGACCACACGGTG
CGCGCCGCGGACTCGCACGCCGTCGCCAGCTGCAAGCCCTACATACTCTTCTACATCCGC
AGGGAACTGTCGCTGTGACACCGATACCGACCTCAATACTCACAATTTTGACCCTCGTAC
ACTCAGATTAGTCTGTAATGGTGTAATCAAGAAGGGTGTAATTAAAATCGGGACCTGAGA
TACAAATGGCTGACTCTAAGTGAATGGAGTGACAGAGAAGGGACAAGACAAAAAAAAGTT
TGGGAATCTATGTTCAAAGGTCATTGCCCCTGTAATAATTAAGATTGTAAAAACACTGTA
TGATACAAGTGTTGCCAACTTTTATTTTTTACAGCGCGCTCAAAGATCGTTACAAGTAGC
TTAAAATATATAAAATAAAATGGCTGTTAGGTATGTATGTATGCTCCCGTGTCCTGTGTG
CAAGTATCTTGGGCTCTGTCCTTTTGACTTTTATTATAATATATACATGGAAGGCTCCAT
GAAGCTCGCTGTTGTTAAAATCTACTGAATTGTGAATATGCATTATTCTATGCCTATATA
TCGACTAGTATTTTTTTTTAAAAACCTCATTCTCAAAACACGTTTATAAATTTTATAAAA
TCGTAATTCTCATCACGCATTCGTTTTTGGGAGTGATTTTTGCAAATGAGTATCCGAAAT
AATTTTTTGTAACGTAATAAAATATTTTTAGTCTAAACAATAAATTATGTCAG
(2033 bp)

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