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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39115_c0_seq4
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		acinus_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0002230 P positive regulation of defense response to virus by host
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0006921 P cellular component disassembly involved in execution phase of apoptosis
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0016887 F ATP hydrolysis activity
GO:0019899 F enzyme binding
GO:0030218 P erythrocyte differentiation
GO:0030263 P apoptotic chromosome condensation
GO:0035145 C exon-exon junction complex
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0045657 P positive regulation of monocyte differentiation
GO:0048025 P negative regulation of mRNA splicing, via spliceosome
GO:0061574 C ASAP complex
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
Transcript
Level		FPKM:1.70 TPM:1.34
ORF EntryO_BomoMG12406_complete:A_BomoMG_comp39115_c0_seq4
Sequence
(Nucleotide)
GTTTCTTGTAAATTGTCGTGTGCTCTTTATGTGTTATTGTGAATTCGTGCTATTGTAAAC
AGTGAATTTTGTAGACGAAAGCGTGAGGATGCGTCGGAAAAGTGAGCGTACCGCCAGTAA
GAAGGCAAAGGCCTCTCCTGAAGTAAAAGTTGAAAAAGCAAAGAAAACAAGAACGCGACG
TAGAAAACAATCTTCTTCATCAGAAAATGATTCTCCAGATGAAGCAAGTCCAGTGCGTGT
AGCTGTACCCGTGGCGGAAGAGGAACGTAAACCACCACAAACTCCCGCCAAAGGGGAAAA
TGTGGACGAGTCTCCGGATCAAGTTTGGCAGGTTAAAACTGCTGAGGGATCAGGTGATGG
TGGAGAAATACAAAAACTCAAAATTTGCTTAACACGTCCGCCATCTACACCAGAACGTGC
TGAAAGATCGCCGCGTCAAAAAAGGAAACACTCGCGAGCTACTAGTTCTAGTGATAACCC
TAGTGATACATCGGAAGAAAAGAAAAAAAATAAACACCGTTCTAAAAGATCTTTTCGAGA
TAAAGATGGCACTGACAAAAATCAAGACAGCCAAGAAGAAGACCAAGACGCTGAAAATGA
AGATAAAGAGAAAAGTGATCATGAAGTATCTCAAAGTGAAACAGAGGCCAAAGTAGAGAC
TTCTGTGTCTACAACAAATAAAGAAAATAAATCAATTGAAGAATCATCCGAAGATGCTTC
AAGCAGTATAAAATCTAGTAATGTCGTAGAAATTTGTGCTTCTGTACAGGACGATCCTGT
TGCTGATACAACTGTTGGATCACCCAGACCTGAAACAAATGCTTCACTCAAACTTGACTC
AGTATCAGCTGCGGCCGCTGAAACAACTGAAGTAAACAATGAAAATACTGATGAATCCAT
AAATGATGAAAAAACAGAGATAACAAATGAAGACAAAACTGTTGAAACAACAAATGCTGA
GTCTGTTACTGAAAATAATGAATCAACATTAGATACCTTAAAGGATGAAACTGTTTTAAT
TGAAAAGGAGGAAACAACTGTTGTAACTACCAAAGACACATCTCAAACAGAGATAAATGA
AACTGAATCCAATGACAATAAGTCAACCAGCAGGGAAAGAAGTGATTCTGTTGATAAATC
AGAGGTATTAGAATTACATCCAGAAGAATCAAAAATGGAAATACAAGATGTGGAGATAAG
TAAATCAAAGGATATTGAAACCAGTGAGGAATTAGAAGTAACTGTGGATCATAATGCTGA
GGTAAGTATTAAAAAGGGACAAACAGACAGCAATGAACCAGAGACAAACACTGGAAATGC
AAAAGTTATTAATGAATCTGATGTTGTAGAGAAATCCAGAAAAACTTCAACAGATTCTGG
ACAAAGCAATGAAGTGACCAAATGCAATAATGGGAAATATTCATCAAACAATAATAGCAG
CAATAGGAAAGATCTAGGACAGTCAGATGAAACAACAACATCTCAAAGTGAAATTGTACC
AAATGGTCAAATTGTTCCAATTGTTGTAAATAGGAAAAGAAAATGGGGATCTAGACCAAG
TAAACTAACAACACAGAAGTCAATCACTATATCAACTGATGTGTTGAAGGATATCATACC
AAATGTTAAACCTGTTGAATTTGATGAAGTTATTGAAGAGAAGAAACATAAAAGAATAGA
AGTTAAAGAGAAAATTGATCGGCCTGTCTTGCCCAAAATTGTTATAGATAATTCAGAAAA
TGTTGAACAAAAGAAAAAAGATGAAAGAAAAGAGAATGACAAAGACAAAGAAAACGTTAA
ACTAAAGGAAATTAACTCCAATAGAAAAATATCGATTATCAAAGAAAAAGACAGTATAAT
TGCAAGACCGCCCAGTCCACCAAGGCACAAACAGTCAAATATACTCTTTATCACCAATTT
AGTCAGGCCATTTACACTATTGCAACTCAAAAACTTACTGCAAAGAACTGGCAGGATAGA
GGAAAATGGGTTTTGGATAGATAAAATAAAATCTAAATGCTATGTGAAATATGAAACTGA
AGATCAAGCTGTTGAAACAAGACATGCCTTGCATGGGGTGACATGGCCTGTATCAAATCC
AAAGACTTTACATGTGGACTTTTCAACAACAGAAGCATTTGACAAAGCATTATCCAGTGA
GGAAGCAGAGAGTGCTCCACCTTCGGCAATTCCAGGAACAGTTGAGGATTGGCTTCGGGA
GCAAGATCTGAAAAGAGAGGCAGAAGTGGAAAAGTCATGGGAGCGTAAAGGAACTATGAG
GGAGTGGGATGTAGGCAAAAATGATAAAGACAAAGAGAGAGACAAGTTGCGACGTGAAGA
GCGTCCATCTGAGAAAAGACGACATCGGACCCCAGAAAGGAGCCCCGAACCAGCGAGAAA
ATTCAAAAAGAAAGAAGAAGAGGCTCCTGCAAAATTACTTGATGATTTATTTAGAAAAAC
AAAAACAACTCCATGTATTTACTGGTTGCCACTGTCTGCTGAAACGATTGCAATAAAGGA
AGAGCAACGTCGCCAGCACATGGCCGAGTATGAACGTCGCTTACTAGAGCAACGTCGGCC
GCCGCCCCACCGACGTCATTAGCATGAAAGGCAAGCTTGGAGGGAAAGCTATGATTTAAT
TCGTCGGAGTACCGCGGTCACTAACACGATGCCGGGGGATATGAAGCTCGGCTCTGAGGA
TGTGCGCGGGTCCTACGCTGACTTGATGATTGTCACAACGAGATATTGGCGATACTTGTA
GACGTCTTGGGACGTTGTCGATTAGTTGTTGCTAAGCAAAGTTGAACTGACTTGCTGGAA
TTTTATGACCGGCGATAAATGTGCGAGCGATAAATGTGACGAGAATGGAGCCGTAATTAA
AAATGCTCAAGTCAATAAGTCTATCGTGAACTAGTTAAACGAGGGCGCCGTTTACAGTAT
ATTTCCAGAGAAACAAAAGAATACAGGAGGCATGTTTGATGTCTGTCTAATGATTAGTCT
AGAAAGCTGCTCACTTGGTGGAACGCTGATCGTCATGGTTTAATCGGAAGACGTTGAATG
TTTCCTACGAATCACGCAGCTATGTGAAAATGTGTTAGATCCTTCTGTCATATAAATTCT
GTTCTGTCCAATTATATATTCCAGTCACTGTATGTTGAATAAATACTTTTCAA
(3173 bp)

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