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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39115_c0_seq3
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		acinus_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0002230 P positive regulation of defense response to virus by host
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0006921 P cellular component disassembly involved in execution phase of apoptosis
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0016887 F ATP hydrolysis activity
GO:0019899 F enzyme binding
GO:0030218 P erythrocyte differentiation
GO:0030263 P apoptotic chromosome condensation
GO:0035145 C exon-exon junction complex
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0045657 P positive regulation of monocyte differentiation
GO:0048025 P negative regulation of mRNA splicing, via spliceosome
GO:0061574 C ASAP complex
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
Transcript
Level		FPKM:0.28 TPM:0.22
ORF EntryO_BomoMG12404_complete:A_BomoMG_comp39115_c0_seq3
Sequence
(Nucleotide)
GTTTCTTGTAAATTGTCGTGTGCTCTTTATGTGTTATTGTGAATTCGTGCTATTGTAAAC
AGTGAATTTTGTAGACGAAAGCGTGAGGATGCGTCGGAAAAGTGAGCGTACCGCCAGTAA
GAAGGCAAAGGCCTCTCCTGAAGTAAAAGTTGAAAAAGCAAAGAAAACAAGAACGCGACG
TAGAAAACAATCTTCTTCATCAGAAAATGATTCTCCAGATGAAGCAAGTCCAGTGCGTGT
AGCTGTACCCGTGGCGGAAGAGGAACGTAAACCACCACAAACTCCCGCCAAAGGGGAAAA
TGTGGACGAGTCTCCGGATCAAGTTTGGCAGGTTAAAACTGCTGAGGGATCAGGTGATGG
TGGAGAAATACAAAAACTCAAAATTTGCTTAACACGTCCGCCATCTACACCAGAACGTGC
TGAAAGATCGCCGCGTCAAAAAAGGAAACACTCGCGAGCTACTAGTTCTAGTGATAACCC
TAGTGATACATCGGAAGAAAAGAAAAAAAATAAACACCGTTCTAAAAGATCTTTTCGAGA
TAAAGATGGCACTGACAAAAATCAAGACAGCCAAGAAGAAGACCAAGACGCTGAAAATGA
AGATAAAGAGAAAAGTGATCATGAAGTATCTCAAAGTGAAACAGAGGCCAAAGTAGAGAC
TTCTGTGTCTACAACAAATAAAGAAAATAAATCAATTGAAGAATCATCCGAAGATGCTTC
AAGCAGTATAAAATCTAGTAATGTCGTAGAAATTTGTGCTTCTGTACAGGACGATCCTGT
TGCTGATACAACTGTTGGATCACCCAGACCTGAAACAAATGCTTCACTCAAACTTGACTC
AGTATCAGCTGCGGCCGCTGAAACAACTGAAGTAAACAATGAAAATACTGATGAATCCAT
AAATGATGAAAAAACAGAGATAACAAATGAAGACAAAACTGTTGAAACAACAAATGCTGA
GTCTGTTACTGAAAATAATGAATCAACATTAGATACCTTAAAGGATGAAACTGTTTTAAT
TGAAAAGGAGGAAACAACTGTTGTAACTACCAAAGACACATCTCAAACAGAGATAAATGA
AACTGAATCCAATGACAATAAGTCAACCAGCAGGGAAAGAAGTGATTCTGTTGATAAATC
AGAGGTATTAGAATTACATCCAGAAGAATCAAAAATGGAAATACAAGATGTGGAGATAAG
TAAATCAAAGGATATTGAAACCAGTGAGGAATTAGAAGTAACTGTGGATCATAATGCTGA
GAGAAATCCAGAAAAACTTCAACAGATTCTGGACAAAGCAATGAAGTGACCAAATGCAAT
AATGGGAAATATTCATCAAACAATAATAGCAGCAATAGGAAAGATCTAGGACAGTCAGAT
GAAACAACAACATCTCAAAGTGAAATTGTACCAAATGGTCAAATTGTTCCAATTGTTGTA
AATAGGAAAAGAAAATGGGGATCTAGACCAAGTAAACTAACAACACAGAAGTCAATCACT
ATATCAACTGATGTGTTGAAGGATATCATACCAAATGTTAAACCTGTTGAATTTGATGAA
GTTATTGAAGAGAAGAAACATAAAAGAATAGAAGTTAAAGAGAAAATTGATCGGCCTGTC
TTGCCCAAAATTGTTATAGATAATTCAGAAAATGTTGAACAAAAGAAAAAAGATGAAAGA
AAAGAGAATGACAAAGACAAAGAAAACGTTAAACTAAAGGAAATTAACTCCAATAGAAAA
ATATCGATTATCAAAGAAAAAGACAGTATAATTGCAAGACCGCCCAGTCCACCAAGGCAC
AAACAGTCAAATATACTCTTTATCACCAATTTAGTCAGGCCATTTACACTATTGCAACTC
AAAAACTTACTGCAAAGAACTGGCAGGATAGAGGAAAATGGGTTTTGGATAGATAAAATA
AAATCTAAATGCTATGTGAAATATGAAACTGAAGATCAAGCTGTTGAAACAAGACATGCC
TTGCATGGGGTGACATGGCCTGTATCAAATCCAAAGACTTTACATGTGGACTTTTCAACA
ACAGAAGCATTTGACAAAGCATTATCCAGTGAGGAAGCAGAGAGTGCTCCACCTTCGGCA
ATTCCAGGAACAGTTGAGGATTGGCTTCGGGAGCAAGATCTGAAAAGAGAGGCAGAAGTG
GAAAAGTCATGGGAGCGTAAAGGAACTATGAGGGAGTGGGATGTAGGCAAAAATGATAAA
GACAAAGAGAGAGACAAGTTGCGACGTGAAGAGCGTCCATCTGAGAAAAGACGACATCGG
ACCCCAGAAAGGAGCCCCGAACCAGCGAGAAAATTCAAAAAGAAAGAAGAAGAGGCTCCT
GCAAAATTACTTGATGATTTATTTAGAAAAACAAAAACAACTCCATGTATTTACTGGTTG
CCACTGTCTGCTGAAACGATTGCAATAAAGGAAGAGCAACGTCGCCAGCACATGGCCGAG
TATGAACGTCGCTTACTAGAGCAACGTCGGCCGCCGCCCCACCGACGTCATTAGCATGAA
AGGCAAGCTTGGAGGGAAAGCTATGATTTAATTCGTCGGAGTACCGCGGTCACTAACACG
ATGCCGGGGGATATGAAGCTCGGCTCTGAGGATGTGCGCGGGTCCTACGCTGACTTGATG
ATTGTCACAACGAGATATTGGCGATACTTGTAGACGTCTTGGGACGTTGTCGATTAGTTG
TTGCTAAGCAAAGTTGAACTGACTTGCTGGAATTTTATGACCGGCGATAAATGTGCGAGC
GATAAATGTGACGAGAATGGAGCCGTAATTAAAAATGCTCAAGTCAATAAGTCTATCGTG
AACTAGTTAAACGAGGGCGCCGTTTACAGTATATTTCCAGAGAAACAAAAGAATACAGGA
GGCATGTTTGATGTCTGTCTAATGATTAGTCTAGAAAGCTGCTCACTTGGTGGAACGCTG
ATCGTCATGGTTTAATCGGAAGACGTTGAATGTTTCCTACGAATCACGCAGCTATGTGAA
AATGTGTTAGATCCTTCTGTCATATAAATTCTGTTCTGTCCAATTATATATTCCAGTCAC
TGTATGTTGAATAAATACTTTTCAA
(3085 bp)

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