SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39024_c1_seq1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_protein_purity_of_essence_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:3.65 TPM:2.88
ORF EntryO_BomoMG12170_internal:A_BomoMG_comp39024_c1_seq1
Sequence
(Nucleotide)
TTGGCATTGTGCACGGCGCGCAGCAGACACTGCGCCCGCGCGTGCAGGTGCGCGCTGGCG
GGCGCACACAGCAGCTTCCTGGCGGCCTCGGCCCCGTCCTCCGCTCCGCCCGCCGCGCCC
ACCGACGCGGGCGTGCCGGCTCCCAGCTCCAGCGTCTCCAGGGCCGCACAAGCGAGGCGC
TCTAGAGGGCTCGGCTTCCACATTCCGCTACTGCCTTCTGCCTCCTGTACGATTTTGCTA
GATGACGGACAAGCAGAGGGATCTTCGCTTTCATCGGGCCAGCCAAATTGTTCCTTAGTC
TTACCGTAAACCTTAACCGAATCGACCATTGTAACAGCTTCAGCGTCCGACGAAGGTCCG
AAGTTTATCACCAATTTTTTATCTGACTGAAGTGATTCCTCACGAGTCAAAGGCATGTCG
AACCAGCGGTTGCGAGTAACGTTCGTAGTTTGTAAGGAACGACCCAGTATTTCTATATAA
GCGGGAGTTTTCGTAACATCTTGACTGCCCAGCAATACTCGGAAGCCACAAATCACCATA
TTCGGGTCTGAATTTATGACTTCCAAAGAAAATCCAGTCACTTTGGTAGACACTACATAC
AAACCAGTTGTATTGAGTCGGTGTTTGATTAACGCAGTATTGTATACTTGGAGAAGATCG
TTTCCACCAAATTCGATGTCATTCATTACAACACAATGCTCAAAGAAATCTATAGGGAAC
TGAGTTGTTCCGTTGGCACCCGACTTAGATACGGCTTGATGCGATTTCCGCGGCGCGTGG
TGCGTGTTGGTGCGGGCGCGGCGGCGCGGCGCGTGCGCGGGCTGCACGCTGGGGGCGAGC
CAGTACCCAGTCTTGTCCGGGTTGGCCGCATACATGCGGAGGCTACCGTCTTCACACAAC
AGAATCAACGTGCTTTTCTGTTCGCCTCCGCCGCCGCACCAGTGGCGCACCGCCACCATG
TCCGTTATCTTGGCTTTGGCCGGGACGACCTTTATTTCTTGCACGAAAATGTTAGTAGGT
GTCAACATAAGCACGACCGGGTTGTTCGACGCTTGCATGACAGCTGTGATCAGGCCGGGA
TGTCCGGGCACCTCCGCCCACTGACACAGCGACTGCACGCCCCCCTGCTTGCCGCCGCCG
CGACCGCTCCCTTCCTTCTGCGTTGCGGCCGCCGACAACGTGATCATCGCTGTTCCTTTT
AAGCTCTCCTCAACAGTGTTCAACGGAGCAAGGAAGCTTTTGCCTTGAGCGTACGAAAAG
AATAACATTTTCAATGTATGCGAGTAGTATATGGAGACTCCACCACCGCCAACCAGTCCG
GCCACGTCCTGTATTTCAGGATGGAGTACTTCAAGAGTGTTGGTAACGTAGAAGGTTCCG
AGGCTCGCCCTGGACTCTTCACTCATGGGCTGCCAGTAGATGTGGCCGGCAGAGCTCATG
CAAAGCATGTGCATAACACCGTCTTGGTTCACGAAAGTTACATCTCGTACGTTTCCACTA
GGTACGAGGAAATGATGCATAGGGTTGTTCAAATCCTTGCTGAGGTCATAAATCTTGACA
AAATCCGAAGTTATCAGCGCAAGTTGCGTCTGTGATCCAGGCAGCCATATTGCTTTAATT
ACATAGTTGTTACCCTCTAGACCGGTGTTGAGAACTAGGTGATCTGCTACTGCACCTGCA
CTGTTAAAGGTCAGGACATGACATTCCTTGAGACCGCAGACTGCGAGCAAATCTTCATTC
CACGGGTTCCCGCCGAGACTTAGAACCGTGAACGGTATCGGCGCGGATGACAAGCGCGTT
AGCGTAAGTTTATGTTTCGACGAATCAGCTTGTTTCAGTAAAGTTGATAGCTGGAGAACT
GTGATCTTGCCTTTCTCGTGAGATACAGCTAAATGTTGCCTGCGTCCTTGAGGCGACGCC
AGGCAACACATGGCAACACGTCTTAGTTTATGTGCAGTCATCAGTTGCCTGATTGTTTGT
CCGTTTTCTCCAGTGTATGACATGCGCACGTTCTCGAATGCGCCCTCTTGTGAACCTAAC
GTGGGCAGCATGAGGTTGTCTGTGTGCGTGAAGCGTTTGTCGCCGAGATGCAGATGTGCG
AGTGCCCGCATGGCGCGGCCGTGTGCGCCCGTGGGAGCGTGTCGCTGGCACGCCGCACGC
ACGGCCCCGCACAGCGCCTCCAGCAGGCGGAGCACGAGCTCCATGCCCG
(2209 bp)

- SilkBase 1999-2023 -