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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39006_c0_seq2
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		PREDICTED:_lysine-specific_demethylase_3B_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007596 P blood coagulation
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0032454 F histone H3-methyl-lysine-9 demethylase activity
GO:0033169 P histone H3-K9 demethylation
GO:0046872 F metal ion binding
GO:0046966 F thyroid hormone receptor binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
Transcript
Level		FPKM:14.10 TPM:11.14
ORF EntryO_BomoMG12117_complete:A_BomoMG_comp39006_c0_seq2
Sequence
(Nucleotide)
CCACTTCCCCCGGTCCCCGCGTTCAGTTCTTTGTGCGCTACGGAGGCTCTAGTACGTCTG
CAAGGCACGACTAAAATTTTCAGTCGTGATAGTGTAGCTTAACAGAGTGCTGACTGACTA
CGTTGTGTGTGTGAGTGCAGGTGAACGTATTTTACAATTTCCTGGCCGCATTCAAGGACA
CCTCAGGATAATATCAGGATTCATTAAAACTTCGCCGTAATATTATTGTGAATATCTGTG
ATACTAACTTTCGTTTAGTTTAAAAGGAAGTTTTAGATTTAATTTAACGGAAGATTAATT
TGTGTTCGTGTTATTGAAAAGAGTGAAGCTGTATAATATTTCAAAATTACTTGGATTCTG
GAACTATTTTCCACACTGTCCTGAAAATTGTGTCAGTGAAAGTGATGTCGTCAATGTTAG
TGAGGAAACCAAGTGTGTAAAAAAACAAGAGGAAGTGAGCAAATCGGAGGTGTGCGCTAA
AAGTGACAGTGAAGTGAAGAGTGCAGTGAGTTGTGGTGTGGGCGCGGATGGTGTTGCCAG
CGCCGTGGCCTCCGAGGAGGACGACTGTGTGATAGTGTGCGCTCGCGATGCAGACGATCG
GTCCGACTCAGGAGTGAGTGGTGTCCGGTCAGGCGGCTCCGCCAGCTCCGTGGAGGAGCG
GGAGTGGCGAGGTATGGCGCACGGGTACGGCGGAGGACCGCCGCCGCCCTTGCTGCATCT
ACCCGCTCCGCCGCCCCCCTCGCTCTACGCGCCTGAGCTGCTCTGGAAGCAGCGCTACCA
AACCCCGTTACATCCGCCGCTTCATCATGCCATCACCGATGAATACCTTGCGTATGACAG
AGAGAGACATGAAAGACTGCTACGAGAACGAAGGGAACAAGAGCAACAGATGCTGGAGAA
ACAGCAGAAAGAGAGAAAAGAGAGAGAAAGAATAGAACAGGAGAGAGAAAGAGAACGAGA
GAGAGAGAAACAAGAAAGAGAAGATAAAGAAAGAAGGGAACAAGAAAATGCTGCCTCTAA
ACTTGTTTCGAGGCATTTTGAAGAATCTCTGAGACTAGCCAATCAAAAGAGGGGAGAGCG
GAATAATTTAACATGGTCGATAATGCACAGCTTGACACCAAACCGCGCTGCTCCAGCGCC
AGAACACGATAGGTTACGGGTACCTACGTCGGAACGCAATTATTATTCTCCTCCGGGACA
TCCACCTACGCATCCCACCCATCCTCAACATACATCCACACGGCCACCCGTTTCATCCCC
AGGAGACTACTGCTCCCCACATGCTCGTCTTGTATCTTCCAAGGCTCAAGATAAGAATTC
GTCACATCCAGGCTTACCCAAAGGAGAGCCAAATTTCGCACCTTATAATTATCCTCCATA
CAGAGCCTACGAAAAAATAAAAGATCCACATTTGCCGGCTCCACCGCCACTAGTTTCAGA
GAAAAACACGGTTATAGTAAAACACGATGCAAACAAATTCATCTCGAGCAAAATCATCAG
TATCCGAGTAAGCCTCGAAATGATCCTTCCCCCCATTACCTTCCTTCTCGAACATATCGG
ACGGGGCCTTCGCCTCATGCACCTCCACACCAAACCTTACAACCGGCTCCGCATACTGCT
GCTTTACCTGCACAGGATAAAAGTGGTCGACGGCTGTATCAGCCGCAACCGAAGCCCCAG
CTGCAACGGTCACCGGCCTACTACGCAGCTGCTCCTCCAGTAAAACCGAAGGTTTCGAGT
CCTGCACCTCCACATATTTACGGAAAACCTAGTAATTCTCAAGTATCCACGCATTATGCC
GTCGCTGTTGAACCACCACCTCCACCGATTGCAAAAGCGGAACCTCCGCCTGTACCATAT
CCGCCACCATCTACGTTCTCGCCGGTGCCTAGAACGTGGCCTCCTCCACCGGCACATTCG
CGAACGCCTGAACCTCGTCCAACACCACGGCATGTCGTTGATTCAACCTCGACGTCACCG
TGCCAAACGCAACCTTTAGATTTGGGTGTGCCTAGAGATGATTCCGACCGATTATCCCCT
AGAAGAAGAGCAGCACTCGGTTCGCCATCGCCGTCGGAATCTGATGCGAAACGACGCCGT
CTTGAAGAATCAACAGCACCTCAACCCCTTATAGCTGCAGCAGCAAGTGTAGCACGCGCT
TCCGCTGGGTCTGAACCAGCACCGCTGGCGCCAGGACCACCATGCGACGTGCGTGTACCA
TCTGCAGATGGAAGTATCGAAACACCAGAACGCGCAGCGGGTGCTTCACCGGCCCCAAGA
CATGCGCTCGCCGCGAGTCCGGCTCCAGCGACACCTGTATCTCCCCTAGTCGCGTCTCCT
CTACAGGCTGCGGCACCGCCACCTGCACCGACACCTCCTGCACCACCGGCGACACCTCCA
GTCTCTGTAAGTGGCGACGCTGATACACCTGCGAAAGCTGCGTCATCTCCACGTGATGGC
TCAGCTCCAGTGCGGCATCTTGGAAAAAAAGCATGGCTTCAGAGACACGAAACCGCACCA
ATAGGTGAGGGAGATTGTTCGGGAGGAGGAGGTACTTGTATAACACTTCCAATGACGATC
ACGCGAAATTCAGAGCAGGATGATTCTGGGTCGAACGTTACCGTTCCAGTCGCGGCGAAA
TCCATCCAACGGTCCGTCCGAAAAACTTCCAAACCACGAAAAACAAAGGAGCCCAACGGT
CGAGTAGATGATGTAGAAGAGGACAGTTCCAGCTCTGATCGCGAATCCTCGGCCCCCCCT
AAACGCAAACCTCCAAAGGCAAAACGGAAAAAGAGCAGCGTCGCCCGCAAGATCGGGGAT
GAACCGAAACGAAAGAAGGCCGCTGCCGAAAGTGGAAGCGAAAGTGACAAAGAGAGCGAT
GATAAAGATACAGATTCGGGTGGCAGCGGAAGTGGCAGCGGGAGCACGTCGAGTAGACGC
GGTGCTGGTCGAGCGCGCGGTCGCAGGTCCCGGGGCGGCGGCCGGGGCGGACGGCGCCGT
GAGGAACCGCCTCGCCGCAACGTTGGCAACACGCCCGTCAAACCCCCACAGGACTCTTTT
CTGCAGAGCGGACCGTGTTTCGAGGTTGCTCCGCGTCTCGCCAAGTGTCGCGAGTGTCGC
TGGTCACCCGCACAGCGAGATAAAGATATGCCGAATATCTTCTGCCGTTTCTACGCTTTC
CGAAGACTGAAATACGCTAAAAACAGACAGTTGGCTATAGCCGGCTTCTCAGATCCTTAC
AAGGACGCCGAAGAGGAAGATAAGAAGTTATGGTTGTCGTCATCAGCCGGTGCCGCCGAA
TTAGACATTGAGATGAGTTGCTTCCTTTTGAGGGAGATTGGAGACCAGTTCTGTGAACTG
CTACAACAAGAGAAAGAAGCGGAATCGCACCATTTGAATACTGATAAGACAGTAGCATGG
AAACGTGTTGTACAAGGAGTTCGTGAGATGTGTGATGTTTGTGAGACCACACTTTTTAAC
TTTCACTGGACTTGCGGGAAGTGCGGCTTTGTTGTCTGCCTAGACTGCTATAAGACAAGA
ACCACAACTGAAGCTACCACAAATTCGAGTAGTGAGACAAGTAGTACAAGCAATGTCACC
ACTAACGGAGAAAGAGATTCCTTTGGCTGGTTGACGTGTACAATGGGCGGCCCGCACCCC
GCGCGGCGGCTGCTCCTCACGCAGATCGCGGCGGGCGGCGCGCTGGGGGC
(3710 bp)

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