SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp39001_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		hydroxyacyl-coenzyme_A_dehydrogenase_[Bombyx_mori]
Ontology
GO:0000062 F fatty-acyl-CoA binding
GO:0003824 F catalytic activity
GO:0003857 F 3-hydroxyacyl-CoA dehydrogenase activity
GO:0003985 F acetyl-CoA C-acetyltransferase activity
GO:0003988 F acetyl-CoA C-acyltransferase activity
GO:0004300 F enoyl-CoA hydratase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016507 C mitochondrial fatty acid beta-oxidation multienzyme complex
GO:0016508 F long-chain-enoyl-CoA hydratase activity
GO:0016509 F long-chain-3-hydroxyacyl-CoA dehydrogenase activity
GO:0016829 F lyase activity
GO:0032403 F protein-containing complex binding
GO:0032868 P response to insulin
GO:0035965 P cardiolipin acyl-chain remodeling
GO:0042493 P response to xenobiotic stimulus
GO:0042645 C mitochondrial nucleoid
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
Transcript
Level		FPKM:51.50 TPM:40.69
ORF EntryO_BomoMG12108_complete:A_BomoMG_comp39001_c0_seq1
Sequence
(Nucleotide)
AGACTACAGCCCGCCCGCGCTCCTCTCCCCCCTTACCCTGCGAACTCCAATCCAGCAACG
AAAGTTTAGGTTCAAAGTCTGAAACAAAATTATTTAATAAGAATAGTTTATTTTTAAGTT
TGAATTTTTTTTTATATTAATTTAAAAGTAATGGCGAATAGCAAAATATTAAGTGCCCTT
AAGATCTTGAGAAGCCGTAAGGAATTATTCATATCCGGTGTACATAGCCGAAAGTATGCC
GTTCCAGCAAGCCAAGTACATACAAAATGCAAATTGGTCAATGGAGTTTACGTAGTCACT
TTGGACTCTCCAAATGTTAAAGTAAACTCACTTAACACCCAAGTGATGGAAGAAGTTAGT
AACATCGTAAATGAAATTGAAACAAATTCTGGTATTGAAGCTGCAGTCATTATATCAGGC
AAGCCTGGATGCTTCATTGCAGGGGCTGATATAAGCATGATCGAAAACTGCAAAACAAAG
GAAGAAGTTGTCAGTCTGTCTAAAAGAGGACATGAAATATTCAGAAGAATCGAACAATCA
CGGAAACCGTATATTGCCGCAATACAAGGCAGCTGTCTAGGAGGTGGATTAGAGACTGCT
CTTGCATGTAAATATCGCATTGCTGTGAAAGACTCCAAAACAGGATTTGGACTACCAGAA
GTCATGTTGGGACTTTTGCCCGGCGGTGGAGGGACACAGAGATTACCTGCTCTCACCTCC
ATACCTACAACTTTGGACCTAGCTCTAACTGGTAAAACTGTGAAAGCTGATAAAGCAAAG
AAATTGGGAATTGTAGATCTGTTAGTTTCCCCTCTTGGACCAGGTTTGGGTCAGCCTGAG
GAAAATACAGCCAAATACCTCGAAACTGTAGCTATACAGATTGCAAAGGATATAGCTGCT
GGAAAAATAATTGTTGATAGATCGAAAAAAGGCCTAGTACAGAAGATTACTGCAATCGTA
ATGCAATGGGAGTTTGTGAAAAACATCATATTTAAGAAAGCCAAGGAACAAGTAATGAAA
GCATCACGTGGACTCTACCCTGCCCCTCTGAAAATACTTGAAGTAGTAAGAACAGGAGTG
GACAAGGGTCCTGTAGCCGGTTATGAAGCAGAAGCACAAGGCTTTGGTGAACTGGCTATG
ACTCCTCAGAGCAAAGGGTTGATTGGTTTATTCCGTGGACAAACAGAATGTAAGAAGAAT
AGGTTCGGAAAATCCCAAGTTGATGTAAAAACGATTGGTGTTCTTGGTGCCGGTTTGATG
GGAGCAGGTATAGTGCAAGTGTCAATCGACAAAGGCTACAATGTCGTAATGAAAGACGCC
ACTAATGCAGGCTTGTATCGCGGCGTTGGACAAATTCAAACCGGACTAAGTAATGCTGTG
AAACGCAAAAGAATTTCATCTCTACAAAAGGATAAGTACTTATCGAATCTACTTCCTACA
TTGGACTATGCCAAGTTCAAAAATGCGGATTGTGTAATTGAAGCCGTTTTCGAGGATATT
AACATCAAGCACAAAGTTATCAAAGAGTTAGAGGCTGTAGTGCCGAAACATTGTATTATA
GCTACAAACACTAGTGCTATACCTATTACAAAAATCGCAGCTGGCAGCAGTCGTCCTGAT
AAAGTAATTGGCATGCATTACTTCTCACCAGTTGACAAGATGCAATTGCTAGAAATTATT
AAGCACCCCGGCACCAGCGACGATACATCGGCAGCCGCTGTGGCCGTAGGTCTACGACAA
GGAAAGGTCGTCATCACGGTGGGGGATGGGCCTGGTTTTTACACCACACGTATCCTTTCT
ACTATGCTTAGTGAAGCAGTAAGACTGCTACAAGAGGGTGTTGATCCTAAAGAACTGGAT
AACATGACAAAGCAATTTGGTTTCCCTGTCGGCGCTGCTACATTGGCTGACGAAGTTGGT
ATCGATGTCGGCTCTCACATCGCTGTGGATCTAGCCAAGGCCTTTGGTGATCGCATTAGC
GGAGGAAACTTGGGTATCATGCAGGACTTAGTGCAAGCTGGATACATGGGACGCAAGTCC
GGCAAAGGTTTCTATGTGTATGAAAAAGGCTCTAAAAACAGGGAAGTAAACCATGGTGCT
ATTAAAATCCTGAAAGACAAGTATGCATTAGAACCTCGTGGTGCTAATACTGTTGAAGAC
CAACAACTGCGAATGGTTTCCAGATTTGTAAATGAAGCAGTGTTATCATTGGAAGAAAAA
ATTCTACACAACCCCCTTGAAGGTGATGTTGGTGCGGTCTTTGGTCTCGGCTTCCCTCCA
TTTACTGGTGGACCTTTCAGATGGGTGGATCAATATGGCGCTGATAAATTAGTAAAGAAA
ATGGAGGAATACCAGGGTCTTTATGGCGCTCCATTCAAACCAGCTCAAACCCTTGTAGAT
ATGGCCAAAGACACAAGTAAAAAATTCTATAAGAACTGAGTAGGAATTATGTCACTTGTA
GTTTAGTTCATATTTAAAAAAGCTTAAGGAGGATTATCAAAATTATATATTCTAGGGTGA
CGATTGTCTCAGTGTGATTTGAGAGTTGGACATTTTATGTCCCGTTTGTGTCTTAAGTTG
TTTGGATTCATATATTTCATGTCATTATTTATAAAAATCATGATAAGAATTTTCATAAAC
AATTATATAGACTGTTGATAATAAGATAAAGCTTATTTGAGATTTCTATTAAGTATTGGA
TATTACATGTTTCTATAGATTTATTAAATATTTATTTCTGAAAAAAA
(2747 bp)

- SilkBase 1999-2023 -