SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38991_c0_seq1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		DNA_damage-binding_protein_1_[Papilio_xuthus]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016567 P protein ubiquitination
GO:0031464 C Cul4A-RING E3 ubiquitin ligase complex
GO:0031465 C Cul4B-RING E3 ubiquitin ligase complex
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
Transcript
Level		FPKM:8.86 TPM:7.00
ORF EntryO_BomoMG12080_3prime_partial:A_BomoMG_comp38991_c0_seq1
Sequence
(Nucleotide)
CTCGCGCAGTCAGAGCGCGCAAGAGTCGGTGTTTTCGGCAAAATAGCGCATTGTTTTAAT
AATAAATGGCTGCTAAATAAAGTGTTTATATTGCGTGACAAAGTTTAAAAGTGAATAAAA
ACCATCATGTCTTACCACTACGTGGTCACAGCCCAAAAACAGACTTCGGTCACAGCATGT
GTAACAGGAAACTTCACATCACCAACAGACCTAAATCTACTAGTAGCAAAGGTGTCTCGC
CTGGAGATGTACTTGGTCACACCAGAAGGACTTCGCCCCATGAAGGAAGTTGGTTTATAT
GGAAAAGTTGCAAAGATGAAACTCTTTAGACCACCGTATGAAAATAAAGATCTAGTATTT
ATTCTAACTGCAAGATACAATGCCATGATATTAGAATGGCGTACAGGTGCAAATGGTGAT
CTCGAAGTTGTGACACGTGCACATGGTAATGTATCCGATCGAATTGGGAAACCATCAGAG
AACGGCATCCTAGTTGTGATAGATCCCCAGGCAAGGGTCATCGGGTTGAGGCTGTATGAC
GGTCTCTTCAAGATTATACCATTGGAGAAGGACTCAGCAGAGCTGAAGGCTGCCAGCTTG
AGGTTAGAAGAATTGAATGTTTACGATGTCGAATTCCTTCATGGATGTGCGAATCCGACA
TTGATACTGATCCATCAGGATACAAATGGGAGACACATTAAGACACGCGAGATAGGATTA
AGAGATAAAGACTTTATAAAAGTATCATGGAAACAGGATAATGTTGAAACTGAAGCATCC
ATACTCATTCCGGTTCCGAGTCCACTAGGCGGAGCCATAGTTATTGGTCAAGAATCTATA
GTGTATCACGACGGTCAGAGCTATGTGGCTGTCGCTCCACCGCAGATCAAGATGACACCT
ATCAACTGTTACTGCCGCGTGGACAGCCGCGGCCTGCGCTACCTAGCCGGCGACATCGCG
GGGAGACTGTTCATGCTGCTGCTGGAGTTACACGAGAAGATGGACGGCACGCAGGCCGTC
AAGGACCTCAAGGTCGAGCTCTTAGGCGACATCCCCATCCCGGAGTGCATGACGTACCTG
GACAACGGGGTCGTGTTCATCGGCTCCCGGCTGGGCGACTCCGCGCTGGTCCGCCTGTCC
AGCTCCCGGGACGACACTCACCAGTACGTGCTGCCCATGGAGACGTTCACCAGCCTCGCG
CCCATCGTCGACATGTGCGTCGTGGACCTCGAGCGCCAAGGACAGAGCCAGCTCATCACC
TGCTCCGGGGCGTTCAAAATGGGTTCGTTACGGATCATCCGCAACGGGATCGGCATCCAG
GAGCAGGCCTCCATCGACCTGCCCGGCATCAAGGGCATGTGGCCCCTCACCCTCGCCCCG
GACTCCGCCCACCACGACACCCTGGTGCTGTCCTTTGTCGGACAAACTAGGGTGCTGGCG
CTTAATGGCGAAGAAGTCGAAGAGACGGAGATCAAGGGGTTCCTCTCGGACAGACAGACG
TTCTTCACAGGCAACGTATGTTACGACCAGCTGATACAGGTGACGGACGAGGGCGTGCGG
CTGGCGGGTCGCGCGGGCGCGGGGTGGTGCGTGACAGTCGAAGAGACGGAGCTCAAG
(1617 bp)

- SilkBase 1999-2023 -