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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38985_c1_seq3
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		hypothetical_protein_KGM_19610_[Danaus_plexippus]
Ontology
GO:0004559 F alpha-mannosidase activity
GO:0004571 F mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006486 P protein glycosylation
GO:0006491 P N-glycan processing
GO:0008152 P metabolic process
GO:0009311 P oligosaccharide metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0036508 P protein alpha-1,2-demannosylation
GO:0036509 P trimming of terminal mannose on B branch
GO:0044322 C endoplasmic reticulum quality control compartment
GO:0046872 F metal ion binding
GO:1903561 C extracellular vesicle
GO:1904380 P endoplasmic reticulum mannose trimming
GO:1904382 P mannose trimming involved in glycoprotein ERAD pathway
Transcript
Level		FPKM:6.37 TPM:5.03
ORF EntryO_BomoMG12061_5prime_partial:A_BomoMG_comp38985_c1_seq3
Sequence
(Nucleotide)
CAGCCGTTTCCGAGAAGATTCATCAGCTACCAAAAAAACATGGACTTGTTCCAATATTTA
TTAATCCGAATACAGGACATTTTCTGCCTCACGCCACCATCACTCTCGGAGCAAGAGGGG
ATAGTTATTATGAATACCTGCTAAAACAATGGCTCCAGACTGGGAAAACAATCAACTATT
TACTGGATGATTATTTAACCGGCATAGAAGGTGTACGTGAATTTTTGGCAAAACGTTCAT
CACCTAATAAACGATTGTTCATCGGAGAGTTGTCTGCTGGTTCAGAGGCTTTCAATCCGA
AAATGGATCATTTGACCTGTTTCTTGCCTGGAACATTGGCCTTAGGTCATTTGAATGGCC
TCCCCGACTGGCACATGACAATGGCCGAGGAACTTCTCTACACTTGCTATTTAACTTATG
CTGCACATCCAACGTTTTTAGCTCCAGAAATAACACATTTCAATCTCGCGAGCACAACAG
ATGATATGTATACGAAATCGGCCGATGCTCACAGCTTATTGCGACCGGAATTTATTGAGA
GTTTATGGTATATGTATCAAATAACTGGCAATACTACCTATCAAGAATGGGGCTGGCAGA
TATTCCAGGGCTTCGAAAAATATGCCAAAGTGCCAAACGGCTATTCGTCTCTAACAAACG
TGAAATCTGAAAATCCAATACCACGTGACATGATGGAATCTTTCTTTTTGTCAGAAACAC
TTAAGTACTTGTACTTATTATTGAGTGACGATCGCTTTCTCATCGATTTGAATAAGTATG
TCGTCAATTCGGAAGCGCACCCTTTACCTATACATAAAAATTAGTGAGATTTAAAGTAAT
AATAATACGTTAATGTTTATTTAACATAAGACGTATTCGCATGATTTAGTAGAATAAGTC
GCAATTAGCTAAATATGCCGCACTTTTTTTTCTCAACTAATATGTCAGTATATTTATTTT
AAAATGAGCACTATCATACTTAAAATTCATTCGTCATTCGAGTAATAACTGCAGGATTCA
GTAGTTTTCAGTAAAGTTGAATTTGTTGACGGACTCCTCACTAAACATTTAGAATTTAAA
GCTGTGATCATACGCGAATTACAATCAGTATTTATATTCTGACGTGCCTGTTACTTAAAT
GCCTTATACGTTAAGGGAGGGAGAGCGAGCTAAAGTTATCACTGGATGTTAGTTTGAGCG
GAATTAGTCAAATTATTATTAATGCGTGACGGGTGCGTTAATGTTTTATTTTAACAGTAG
GTACAATTTACAATTTTGACATATTAAAATTGTCTTTCCATAAAATTTGACAGTTAAACA
GTTTTACGCACAACGAACTAACTCCCTTCGATTTCTCCTTAAAAACATACTTCTGATTTT
TCAATAAACAGTTTTACCGTCAAATTATTATATATTTAATTGTATTGTTTAGGGTTTGTG
TGGCGGTAGTTTAAAAAAGCTTCGTGATTGCACATCCGTATCACGAATGTTTGTGTTCAT
TGAATTCTCTTCTAAAAGCAATTTATTATGTACTTATTAGATTTAATATTATATTAAAGA
ATATTATTTATTATGTAATAATGAAATTAAATGAAATACGTAAGTATAGTACTTATTTTG
ACTCGATTCGTGAATGTATTTGTTGCATATGCATATGTTGTTTGTAATTATATTATAAGA
AAACCGATACATGATAATTTCAAGCAATATCGTAAAGATTAAGTCGAAAAGTCCATGGTT
ACGCGCCAAAAAATTTCGTAAAAATATTAAGAAAGCTAGAAAAAACATGCTGTTTTTCGT
GATATAAAACCAGTGAGATTTTTCTAATTAAATTTAAGCTAGTTTGCTAGCGAATGCCAC
TAGATGAAAAATAGGACGTACCGTTTTATTCGTCAAATCGAATTTGTGCCACAGTTGCTG
TAACTGAATAACATATATCACATTACATAAATTGGAACAATTTTATTTACAGAGTACAGC
AATGCACAAAAGTATTACAGTATTTTATGGGGAGACTCGTTCTTTTTAAATATACGTTTT
GAATAATTTTTAATATTGTCCATGGGTTCCACATACATCATCAGAATGAGGTGCTTTAGT
CTGTGTCGTTGAAATTATATTCTTTCACAATTTATTCAAATTCCATCCATAAAACTTTTC
AAACACATAAGCGAATTATATTGTACTTTAATAAAATAATTTAAATGTTTAGTGTTATTC
GTGCTAGTAATTTATTTAGGTATTAAGAAATTTACCTATACTTAAAATAGACGTTCA
(2277 bp)

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