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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38939_c0_seq2
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		putative_light_protein,_partial_[Operophtera_brumata]
Ontology
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005794 C Golgi apparatus
GO:0005798 C Golgi-associated vesicle
GO:0005829 C cytosol
GO:0006623 P protein targeting to vacuole
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0008017 F microtubule binding
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008333 P endosome to lysosome transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030123 C AP-3 adaptor complex
GO:0030136 C clathrin-coated vesicle
GO:0030897 C HOPS complex
GO:0031410 C cytoplasmic vesicle
GO:0031902 C late endosome membrane
GO:0033263 C CORVET complex
GO:0034058 P endosomal vesicle fusion
GO:0035542 P regulation of SNARE complex assembly
GO:0042144 P vacuole fusion, non-autophagic
GO:0042802 F identical protein binding
GO:0043621 F protein self-association
GO:0045055 P regulated exocytosis
GO:0046872 F metal ion binding
GO:0048193 P Golgi vesicle transport
GO:0051020 F GTPase binding
GO:0071439 C clathrin complex
GO:1902774 P late endosome to lysosome transport
Transcript
Level		FPKM:2.95 TPM:2.33
ORF EntryO_BomoMG11955_5prime_partial:A_BomoMG_comp38939_c0_seq2
Sequence
(Nucleotide)
CAGAAAAGTGCAGAACAGAACAAACGAAAGAAGAATTACGTTTTTATTATTAAAATGTGA
TTTTTTTAAACGGTTGAAATTCAAAACAATGGCTGTTAATATTGAGAGCTGCGAAAGCTT
GCCTCCCGATGAGGAGCCGAAGCTAAAATACGATAGAATGGAAAATGATTTATTGAATAT
TTTACTGAAAGACGCTGTCAGTTGTATTTGTGTTCACACCAAATTCATCTGTATCGGAAC
ACGTTGGGGTGTGATACACCTGCTAGATCACGAAGGTAACATAGTTGCTATATCCCAGGA
CGGGAAGACTGAATTCCAGGCTCATACTATCGCTGTCAACCAAATATCTGTAGACCAAAA
TGGGGATTACATAGCGAGTTGTTCAGACGATGGTAAAGTTGTCGTATATGGATTGTACAG
TAATGATAACACGCACAACCTAAATTTAGGCAGGGCAGTGAAATCAGTTGCATTGGATCC
TTGCTACTTCAAGTCAGGTTCAGGAAGAAGATTTCTTACAGGTGATCACAGATTGACACT
ATATGAAAAATCATTCCTTAATCGAATACGAACTACAGTATTACATGAATGCAAGGGAAA
CGTACAAGCCATGTCCTGGCAAGACAGGTTTGTAGCATGGGCAAGTGAAGTTGGGGTCCG
TGTTTATGACCTAGTTGCTAAATGCTCTCTAGGTCTCATCCAATGGGAAAAGAACCTAAA
TAGATCTATTGAAGACTACCGCTGCAATCTTCTCTGGTCTGCTCCTAAGACTCTAATGAT
CGGCTGGGTTGATACCATCAGGATATGTGTCATTAGAAAGCGAAGTCAAATTGAATTACA
GACTCGTGATGTCACAGAATACCTCGTGGATCCAATATATACCTACCAAATAGATTATTT
TATAGGAGGTCTGGGCCCTTTGGACGATCTATTAGTTTTATTAGCCGTTCCAAAAGAATG
CGATCCTAAAACCGGAAAGTCGCAAATGCCCGTTTTAATAGTGGCGAATTATAAAGGCTG
CGAATTCTGCGAGATATCTTGGGAGACTTTAGACATAAGGGGCTACCAAGAATATAACTG
TAATGATTACCATTTAGATATGCTTATAGAAGAAAACAGATTTTTTATTGTTTCCCCCAA
AGACATTATCATAGCGAGCCCTTACGACATTGACGATAGAGTCACTTGGTTGACCCAACA
TAGAAGGTTCGAAAAAGCTATTGCCGTGTTGGAAGAGGTCGGTGGTAAAACTTCTAAGCA
CTCCGTGATGACGGTGGGCGTACAGTATTTAGATCACTTGCTCTCTGAACATCTTTATCA
AGAGGCTGCCATTCTCTGTGCCAGAATATTTAAAAACGATAAAGTTTTATTAGAAAATCA
AATATTAAAGTTTGCCGGCGTCAAACAACTTAGAACTATAAGTCCCTACGTGCCGAAGAC
GCCTGAACAAGCTTTAAGTCCTTACATATACGAAATAATACTTTTCGAATACCTCGAAGT
GGATTCGCGAGGATTTTTAAAAATAATTAAAGAATGGAATCCAACTCTATACAAAACGAG
CGTCGTTATAAACAAAGTAATCGAACATTTGTTAAACACCGAAGTTGACACGAACGTGTA
TCTGGAAACCTTAGCTTTACTTTACTGCCACCAAAAGCAATACGATAAAGCGCTGACAAC
ATTCTTAACATTGCAACACAAGGATGTATTCAAATTGATAACAGACCACGAAATCTACAA
CATCATACAGGACAAGATACTCGATCTAATGACGCTAGACTGCGACCAGGCTATATCGAT
ACTCTTGAATAACACAAAAATCCCTGTTGAGGTCGTCGAACAACAACTGGCAAATCACGA
AGAATATTTGTATAAGTACTTAGACGCGTACAGCAAGATGGAACCGAACGGTCGATACCA
TGGAAAACTGGTTCGTCTATACGCCAAATACAACAAAGAAAAACTGTTGCCTTTCTTAAG
ATGCAGCGATAATTATCCCATACAGGAAGCTTTAGACGTGTGTCAGGCCAACAATTTTTT
CCCAGAAATGGTTTTTCTACTCGCGAGAATCGGCAACACCAAGGAGGCATTGCAGATAAT
TATCGAACAGTTAAACGACATAAACCAAGCCATAACTTTCTGTCAAGAACAAAACGATAT
GGAACTTTGGATAGATCTGATACAGCAGACGGTCGACAAGCCGGAATATGTCACTTTACT
TCTGAAAAGGATAGGGAACTACGTGGACCCGAGGATGTTGATACAGAACATCAAACCGGG
CTGCGAAATAAAAGACCTCAAAGAGTGCTTAGCCAAAATGATGTGCGACTATCATCTCCA
GCTATCAGTGCAGGAGGCCTGTAAAGTCATTACGCTGAGGAACTATTTTGATTTGCATGA
AAAGCAAGTGATGGCTCAACAACGAGGCATATCGGTGACCGACGACTTCCTCTGCTGCGT
TTGTCACGGGCGGATCATAATAAGGGACATGTCGAATGCTTCTGACCTTCTAGTTTACAA
TTGCAGACATTCCTTCCACGCCGGCTGCCTCCCGGAAGGCGACCAGTGTGCTGTTTGTAA
TGCGGTCAGAATGTGACCCATATTTATTGAGCTCAATCATTTTGAAATCAAAATTTGACT
AAACAAAGATAGAAGTGGTCTGAATACGAATATTTTTTTTCATTATATAGATTTATCTGA
CGCAATATATCGCCATCTGAATTATATAAAGCCCTAAGTCAACATTGTCTGATGGCGATG
GGAGGTTTTACATTAAAAACCCCCTCAAATCACTAATATAATTTTAGTCGTAGTGATTGA
TATCCATAGACACCGATCGACAACCTCAATAGATAAAATAAGTACTTACATCTGTTCTTA
TTACACACACAATTGTGTAATAACAGAGACCGCTCTAAAATCTTAATAATATTTTTAATA
ATTGGTTTGATGTTTCGGACGCCCAGACTACGCTACTGTAAGGTATTGTCGTAAAATTGG
ATCGCTTCTAATCTTTGTTAGAAACATTTATATATACTCATGGTCCATTGTAATAAAATA
ATATTGTTATTTTTTTTTATTGTTAGCTGACAAGAATACGGCCCAACTGATGATGAGCGG
TACCGTTGCTCATGGACGTCAGTAATGCTATTGGACAGTCAGGCCGCTGCCTAAATGTAA
AGCCTCGCAGCAGTGAGGAGAAGAGAATTAGTTGCTCTTTGTTATTCTAATACATAATAC
TATAGTCTATTGTAATTTTATTTTAATCCTTCAACGAAACCTGTAAATTTTTGACTTGTA
TAATTTGTGTGTTAATGTCTAAAGTTTTCTGCCAATTTAAAAAATAATTAATTATAAAAC
ATTAACTAAAGTAAATGATAAGCCTATTGATTAAGAATTCATTTGATTAGTGTACTTTGT
AAATGTTTGTGTTTTATTCGGTATTCGCGAGTTGTAGATATTTAGTTTTCTTCCTCCTTC
AGCACGGAGTCCGTCAAGTGTTCTAAACCTCAGAGATAAGGAGGCGATTTTTTTTTATTT
TTTTTTGCCTTTCTAGGCAGACGACCGTACGGCCCACCTGATGGTGAGT
(3589 bp)

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