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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38875_c0_seq1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_rab-related_protein_isoform_X3_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005769 C early endosome
GO:0005802 C trans-Golgi network
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019882 P antigen processing and presentation
GO:0030670 C phagocytic vesicle membrane
GO:0030742 F GTP-dependent protein binding
GO:0031410 C cytoplasmic vesicle
GO:0031905 C early endosome lumen
GO:0035612 F AP-2 adaptor complex binding
GO:0035646 P endosome to melanosome transport
GO:0035650 F AP-1 adaptor complex binding
GO:0035651 F AP-3 adaptor complex binding
GO:0036461 F BLOC-2 complex binding
GO:0042470 C melanosome
GO:0045335 C phagocytic vesicle
GO:0090382 P phagosome maturation
GO:1903232 P melanosome assembly
Transcript
Level		FPKM:6.97 TPM:5.50
ORF EntryO_BomoMG11793_complete:A_BomoMG_comp38875_c0_seq1
Sequence
(Nucleotide)
TTTTTTTTCTGTTCAAATATCATTTATTTATAGTGTTAAATTTATAGATTATATATTTCT
AATGAAATAAGAGTAGGCTCAAAACTAGATATCAATTAAAATTACGGAAACTAACTGTAC
ATTGTTGAACTGTACAATTATACAACAAACATATGGTTTGATATATTCGAAATAGTAATT
AGTCGATACTAAACAACAATTGAAAACAACAAAACATCGTAAAAATACAAATCAAATACA
TTATACAAATCAAATACATGTCATGCATTTTATTAATCATTGAATTCAATAACTTTATAA
ATTTCAATGCACTAAAGACTACAAGCATGTAGTAATTAATATGCATGCAATAAAAGTGGC
CTGAAGTAGCAGTCAAATCATACACCATTTTTTTAAGAATTCCCTGTACAAAATTTTACT
GTTATTTAATTAAGCCAGGAGTTGTTTTATTATAACTATAACAGGAATATTTGTACATTT
ATAACACTTTATGGCAATCCCGAGTGCGAAATTAAGAAAAAAAGACAATAAATACAAGTA
TCAAGTCTTAAAATTATTTAATTCAATGAAAAACAACTGTTAAACATCAAAAATCATTAT
GATTCGTCTCCACAAGAATCAACATTCGTAATTCGATCATGGCCAGACGTGATTGGTCCT
TCATTGTTTGCTGACGCGCTCAGATTGGTCAGCAACCGCAAGCCTTGTTCGCGCCATCTC
TGCTGTCACCGTTAGCTATTTTGTGATCAATCACGAATTTATCACCGTCCCTGGTGTCGT
TGTTCTGAAGAAGCTTGTCGTTTAATAGAATCTTATTAACTAATGACCGAGCTGCCTCCT
CAATATTGATGTTCTCTTTGGCGGATGTCTCGAACCAGCCCGCGAAACCTTTCTCGCGAC
AGTACTCGTCCATTTTGGCGGGACTATTGACTATACCTTCCTTCTGTTGATCGCACTTAT
TAGCGAGCAGTATACAAGGTATGGCCGATCCATCGGGCAACTGAACTTTCGCATCCAAGT
CATTCTTCCACTTGACGACAGCGTCGAACGTGGCCACTCTGGAAACGTCGAACACTATAA
ACGCGCCCACTGCTTCCTTGTAATAAACACGCGTCATGTTCCCGAAGCGCTCTTGTCCTG
CTATATCCCATAGTTGCAATCTTATTATGGTATTTGAGTCCCAATTCAGTACTTTCAGTG
CGAAATCCACGCCGATGGTTGCTCTATAGTGTTGACTGAAGAACTGGTGGACATATCGTT
TGATTATGGAAGTCTTCCCTGTACCCAATTCGCCGATGACGAGGATCTTATATAAATGCT
CCCGGCGTTCAGCACTAGCCGATGCGTGTGACTGAGACAACCATCTTCCATTTCTATTGG
CCATAATTCCCTCGTATTTATGTTTACCCTTCGCCTCTGACAGTTCCCTTTGCTTCAGCA
ACTGCTCGTGTACGTTTTGTTTGTTCAACTGTTTTATCATTCTCACTAATCGTTATTGAA
AATCGTCCGTAATTGTTTTCACAGCAGCGCCAGTTACGAACATATTTCGGTATATTTTAA
GGTAATAATAACCGGACGCGACAACGCGCTTGCCTTCGTGAAATTACACTGAGAAATTAT
ACATACGTTACGTGACTGATTACTCATAAGCGAGACATTTAAAAATATATGTGTGTTATC
AATAAGGCAAAAATTTCGGATGCTAACACCGGATCACAAAATACCGTTGCTTGACTTGTC
AAAAGTCAACAGTCACAGATGTAAAATCGCGATGAAAAAACATAATTAAATCGATAAACT
AAAAAAACTGAATATTGGAATAACAATCAGCACAATACACGTATTCTTA
(1849 bp)

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