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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38835_c0_seq2
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_remodeling_and_spacing_factor_1-like_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006334 P nucleosome assembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016584 P nucleosome positioning
GO:0016887 F ATP hydrolysis activity
GO:0031213 C RSF complex
GO:0034080 P CENP-A containing chromatin assembly
GO:0042393 F histone binding
GO:0043392 P negative regulation of DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0050434 P positive regulation of viral transcription
Transcript
Level		FPKM:0.23 TPM:0.19
ORF EntryO_BomoMG11695_5prime_partial:A_BomoMG_comp38835_c0_seq2
Sequence
(Nucleotide)
AAGAAAAGCCTGAATCCCATGAAGAAGAAAATGAGGAAGAGTTCCTCAGTCCAGAATCTG
AAACAGATGCAGAAACGGATGATAAAAATGATGAAGAAGAAAATGATGAAAAATGTATAA
CAGAAGTAGAAAAAGATAAAACTGCAGAAGTAGAAAAAGATAAAACTACAGAAGTAGAAA
AAGATAAAGGTACAGAAGTAGAAAAAGATAAAAGTACAGAGGTAGAAACTTCAAAGAGCA
ATGAAGAATTTAGTATTGTAACAGAAGAAAATGTTGAGTCCACTAATGAAGAAGTTAACC
AAGAACAGAAAGAAGAACCTACTCCCGAGGAACAATTTCGAGAAGTAAATGAGGCTCATC
CTCCAGAAGAATCCTCAAATTCAGAAGAGTTTCCAAAGGAGACTGTAGATGATATTGTAG
AAAAAGAACTTATAGAAAAATCTGAAAAAGAACAACAAGAAGATGATAGAAACCTAGAAA
ATAAAGAAGAAGTTGGAGAGACCATTGAAGAACCAGTTATGGTAATTACTGGTGAAGGTA
ACGGAGCAGATTGTGAAGGTTTATGTGAAGAACTCAAGTATTTTAGTGAAGAGGATTCGG
ATTATGATAAAATATATTCTGATATAGTTGACTGTATAGACAGACATAGTGATTTTGATA
GCTCATACTTTTATGGAGATGAAATAGTAGAAGAATTTATGTATTTTTATGGGGAAGGTT
CAGGTTTCGATAATTGCACTGGTAACCCTGAGGTCGAACATACTAACAGTGCAGAAGACA
ACACCGACATTGACGAAGATGCAGAAGAATGTGTTAACGGTGAACATGAAGATAATTCTA
GTGATACTAAAATAAGTAAAGATGTAAATTTAAAAAGTTGTGTACCCTCATTGACTAACA
GATCTCTGAAGAAACAATCTAATGATACCGCTGAAGTATTAAAATCTGACCCTAAGAAAC
ATTGCATTAGAGATTTAGAAAAACCTGATATTTCTGATACAGTACCTAGTGAAAACAGTG
CTAACACAAATATAAACGAAAATAATGATACTGAAAATGTTACTAAAGACAGCATTAAGA
AAGTGAAAGGTAGAAATAAGTTTAAAAAGAAAGCTGGGCTTAGGAAATCAAGCATAAAAG
AAAGTATAAGTTGTGTTCCTGAAACTGACAATGGACATGATGTTAAATCAAGTATCATTG
AAAAGAGGAAAAACAGTGTGTCATCAGAAGATCAAGAGGGCAATACTGACAATGAACGGG
ACAAAAGTCCAGAAAAAGGGGAAAAAGCGGAAGACGATTTACCTACAAAAAAATTACGCT
TAGAAATGACACCAGAAACTGATGGAAATATAACACATTCCAAGGAAAACGAATCGGATA
GTATAAATAACAGTATAGAAAAAGACAGTATAAATTCTATAAGCCAGCGGAAGAAGATAA
AAGCTATAAAAGGAAAATTTAAAAGGAAAATAAAAATTAAAAATAGCACTGTAAATAAAT
CTGAAGAGGATAGAAAGGTTAGTGATAAAAAGGGTAAATCATTAAAGAGATCGATCTTGG
AAGCTACAATCAGTGATAAAGACAAAACAGAATCTCAGAGTGACAGTGATGAAGACATAC
CAGTTGCTAGTGGTAAAAGATTGAAGACGAAACCAAAAAAACTTATCAAATCTACGAGAA
AGAAAGTAGAAGCGAAACTGTTGGAAAAACATTCTAGTGATGAATCAGATGAAGAAACTC
TATACAGCTTAGCTGGCAAGAAATCGCCTCGTAAAATTGTTAAAAAGAAATTGAAAATTA
AAGACAAACAGAAGGCCACCAAGTCCAAATCCCGTGGCGGTTCTGATGACGATGACGTGA
CTCCAGTGAGACAGTCCAGGCGCATAGCTCAGCAGAAGATCAAAGAAGAGGCAGAGAGAA
GGCACCAAGAGGAGGTGGCATTGCGAGAACTCAAATTAATACACAAGAAGAAGAAGGAAG
ATGAAGACGAAGAGGAGTGGGTGGCGAGTGACGTCAGCAGCCCTCGTGTGAGACGCTGGT
CGGGCTCCGCGTCCGACGAGCCCAGCCCCGACTCCGACTCTGATGAACCACTCTTCGACC
AGCCCCCAGAAGAACCTGACTTGAATTTCGACAAATCTGACCACGAGTTCTCACCTGAAT
CCGACTTGGAGAGCGGAGAACCCGTCGAACCCACGAAAAGGGCAAGGACGTTACAAGAAG
GTCAAGACGAAGGGTTCTGCAAGCGGTGCGGCAGCGGGGAGCAGCCCGAGTGGATCCTGC
TGTGCGACCGCTGCGACGCCGGCTACCACGCCAGCTGCCTCAAGCCCATGCTGTTCGTGG
TGCCCGAGGGAGACTGGTTCTGTCCTCAGTGCAACCACGAAAAACTAATAGAATCATTAG
AACTTGAATTAGTGAAGTACGATGAACTGATGGTACTAGTCGAAGAGGAAAGGGCCAGAA
AGAAGGCGGAACTGAAAGAGAAAGCGGTAGCGGACGCTGAAGCGGGAGCGGTCCGCGAGT
CCGACAAGCGGCCGGACAAGCGGGACCAGGACTCGGAGTCGGAGGAGAGCAGCAGCAGCT
GGTCGTCGTCGTCGTCGGGCGCCGTGTACCGGCTGCGGGCGCGCCGCCAGCTGCCCGTCA
GCTACCGGAGTCAGGAGTACGACAGGCTCATCTCCACTGCCATTAAGGAGGAGTACGTGG
AGCCGACCACGAGCGCCGGGAACCAGGGTCGGGGGAAGGACATCTCCACCATCATCGAAG
CTGCCGAGGAAGAGAAGCTGAAGGCAGAGCGCGAGGCTGTGGAGCAGGGTAAACCTTTAG
AATCGAAGAAGAGAAGCTGAAGGCAGA
(2847 bp)

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