SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38827_c0_seq1
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		peptidoglycan_recognition_protein_precursor_[Bombyx_mori]
Ontology
GO:0000270 P peptidoglycan metabolic process
GO:0002376 P immune system process
GO:0004040 F amidase activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005887 C integral component of plasma membrane
GO:0006952 P defense response
GO:0006955 P immune response
GO:0008270 F zinc ion binding
GO:0008745 F N-acetylmuramoyl-L-alanine amidase activity
GO:0009253 P peptidoglycan catabolic process
GO:0016045 P detection of bacterium
GO:0016787 F hydrolase activity
GO:0042834 F peptidoglycan binding
GO:0045087 P innate immune response
GO:0046872 F metal ion binding
GO:0050830 P defense response to Gram-positive bacterium
GO:0061060 P negative regulation of peptidoglycan recognition protein signaling pathway
Transcript
Level		FPKM:294.01 TPM:232.29
ORF EntryO_BomoMG11680_complete:A_BomoMG_comp38827_c0_seq1
Sequence
(Nucleotide)
GGGATAACGAAAGAATTTATGTACTAAGTCACATTGATTGATCGATCACAGAAGTGAAAA
CATTGTATATTATAATATCTCTGTGCTGTGAATAACTAAATTTCATAAAGTACGATGGCT
GTTCGACTTTTATTTATTACAATTAGCTTAATCTCGGCAGTGACTGCATTGCCTAGTCCA
ATAAAATTAGTTAGTGACTATTCCTTCCCCTTCGTAAGCCGAGAGGAATGGGGTGCAAGG
CCACCAACAATGACATCACCACTCAAAGTCAGTCCAGTGCCCATAGTAGTGATTCACCAC
AGCTACATTCCCAAAATATGCTTAGTTCGAGCAGACTGTGAGAGAGATTTGCGTAATATG
CAAAGAGTGCACCAAGTGACTAATGGCTGGGAAGATATTGGATATAGTTTCGCAGTCGGC
GGTGAAGGAACTGTGTTCGAGGGCCGTGGCTGGAGTTCAATTGGTGCTCACGCGTTCGGC
GTCAACACCCGAAGCATCGGAATCTTGTTGATTGGAGATTTTATTACTAATCAACCGCCC
CAGGCGCAGCTACAATCTGTCAAGGACCTGATCGAGGCTGGTGTGAGGCTCGGTCACATC
CGATCCGATTACAAACTCATCGGACACAGACAAGTCACTCCCACTGAATGCCCTGGACAG
AGACTGTTTGATGAAATCTCAAAATGGGATCACTTTTCACTGAATTGGGATGATTAAAAT
TTAAAATAAGTACATATTAATAATATTTATGAACTGAATAAAGGCTATTGTTGTTTGTTA
AAAAAAAAA
(789 bp)

- SilkBase 1999-2023 -