SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38817_c0_seq1
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		PREDICTED:_protein_son_of_sevenless_isoform_X1_[Papilio_xuthus]
Ontology
GO:0003677 F DNA binding
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005088 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007015 P actin filament organization
GO:0007264 P small GTPase mediated signal transduction
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0008293 P torso signaling pathway
GO:0008360 P regulation of cell shape
GO:0008595 P anterior/posterior axis specification, embryo
GO:0016199 P axon midline choice point recognition
GO:0030154 P cell differentiation
GO:0030676 F guanyl-nucleotide exchange factor activity
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035022 P positive regulation of Rac protein signal transduction
GO:0035023 P regulation of Rho protein signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0045500 P sevenless signaling pathway
GO:0046579 P positive regulation of Ras protein signal transduction
GO:0046982 F protein heterodimerization activity
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
Transcript
Level		FPKM:6.62 TPM:5.23
ORF EntryO_BomoMG11653_3prime_partial:A_BomoMG_comp38817_c0_seq1
Sequence
(Nucleotide)
TTATCCGACCAAATGAGTGAAAAAGATATTTTTTAATTGTTTTCTTACTAAAAAAACTAT
TTATGTTTACAAAAAACTGAAATAGTACAAAATTTGTGTGCTTAAAACATATTTATAAGT
GTGCAGCGCGTCTATATTTTGTTTTATTAGTATTAAAAGTGTAATGTGGTTAGTGTTGTT
AAAAGTTTATAACATTGAGTTTTACATGATTCCTGAACAAGTTTCATTAGTAAGATGCTG
CCCACAGTGGAGGAGATAAGGGGTTATGATTTTTTAGACCCCGAAAATGTAGATAAATGG
AGAGGAATATTCGTAAACCCACTTAAAAAGGTTTTAGAACAAGTGCATCCATCATTGAGT
GCTGAAGAGAGTGCCCTAGAGTATGTGGAATCATTATGCCTGAGATTACTCTCTACGCTG
TGTGCAGCACCGACACCTAGAACTGTACAGGATGTGGAAGACCGTGTGGCTAGAACATTC
CCGACACCTTTGGACAAATGGGCTCCAGCTGACGCTCGGGATGCAGCCACTAATAAGCGA
CGGAGACCATTGCTTCCACATGACAGATTACACAACATGTTGCATAAGGAAGTGTTCCAA
TACAAAATTGACAGTTCAGTGTCAGTGTTCATGACTGCCATATTAGAATATGTTAGTGTC
GACATACTAAAGTTGGCCGGAAATTTTGTTAAGAAAATGTCACAGAAGTCTGGTTATGAT
ACTATAACCTGCCAGGACATAAAGACAGCCATGTGTGCTGATAAGGTTTTAATGGATATG
TTTTATCAAGAGACAGAATTGACAGTGGTGGAGAATTCCACTAGCACAGACAGGAGGGGC
CGGAGGGGATCCCTCTCTTATGCAGAGCTGGTCCGAGACCTCATGACTGACGAGAAGCAC
TTCCTAAGGGACTTGCATCTCATAATAAGGGTCTTCAAAGAAGAGCTAGATAAAATACTG
GATGGAGATACGAGGACTCTGTCCCTGATTTTTGGCAATATAGTGGACATCTACGAACTG
ACTGTCACTTTACTGGGAAATTTGGAGGACGCCATGGAGATGTCAGAGGACTCTCCTTCA
CCATATATTGGAAGTTGTTTTGAAGAATTAGCTGAAGTGGAAGAGTTTCGTGCGTACGTC
CGATACGCCAACATCGTCACCAGGAAGGAGTCCAGGGAGGCCTTGCAGAACATCGTGGAC
GATCCGATCTTATCGGAAGGTCTCAAGACAGCCGGGCAGGGTTTCCTGCTGGCCACGAAG
TACTACCTGCCCCGGTTGCTGCTGGCCCCCGTCGGACACGTGTTCCTGTACCACAAATAC
GTGCTCGCCCTGCTGCACGCCGCGCCCACGGTCGACGACCGGGAGAGCTTTAAACAGGTT
CAGTGCAATTTAGATCCGATCAAGAAATTACTAGATAAAGCATTGGGGAACGGACCGAAA
ATGGACGGTACCCTGCGGATGGCGAGCAGGTCGCGCCGACAGCAAGCCATCGAGAAGTGC
AACGAGCTGGCGCGGGTCGTGGACAACTGGGACAACCGGGACATCGGACAGTGCTGTAAC
GAATTCATCCGGGAAGACATACTGTCGAAGATAGGGCCCGGCAAGAAGGTGGCCGAGCGG
AGGGCCTACCTGTTCGACGGGCTGCTGCTGCTGTGCAAGCCCGCCACCAGCCTGGTGACG
GTGAACAGCGGGGGCGGCGCCGGCGGGGTGGGCGCCGTGCAGCTCAAGCTCAAGGAGAAG
CTGCACATCCGGAAGCTGGAGATCGTGGACCGGCCCGACACGGACGAGGCGCGACACCTG
CTGGAGCTGTCCCCGCGCGTGGGCGGCCCCGTGGTGCTGGCGTGCGCGTCGGCGCCCGAC
AAGCGGAACTGGATGTGCGACCTCGTCATGCTCAACACCAAGCCCATGCTGGACCGGTTC
CTCGAGAGCATCCTGTCGGAGCTGGAGCGGCGGCACCCGCTGCGGCTGCCCCCGCCGCGC
CTGTACCGGTTCGCGGAGGCCGACGCGCCGCACAACATCCTGCTGGAGCAGCCGCCCGTG
CGCCGCCCCGCGCTCGTGCCGCTCGTCAAGGGCGCCACGCTGCTCAAGCTGGTGGAGCGC
CTCACGTACCACGTGTACGCCGACCTGGCGCTCGTGCGCACCTTCCTCACCACCTACCGC
TCCTTCTGCGAGCCCCGCGAGCTGCTGGCGCTGCTCATCGAGCGGTTCCGCATCCCCGAG
CCCGCCGACGTCTACGACAAGCCGCCCCCAGCGGAGAGCATAGAGAGCGTGGCCAGCAGC
GACGCCGAGAAGCTCAGCAAGAACACCGTGAGGGAAGACTGGAAGAGGTACAGGAAGGAG
TTCCAGCAGCCCGTCAAGTTTAGGGTTATTAACGTTATTAGACACTGGGTGGATCAACAC
TTTTATGATTTCGAAAGAGATCCCGAGCTTTTGGACGAGCTCCGAGAGTTCCTGGAGTCC
GTCGACGGGAAACCCATGAGGAAGTGGGTCCAGAGCGTGCTCAAGACCTTGCAGAGGAAG
AGCCAGCCGGCGGAGGGCGAGGGCGCGGTGTCGCACGTGTTCGACCGGGCGCCTCCCGCG
GTGCTGCGGCACGTGTCGGACCCAGAGCGCTGCGACTGGCACCCGCTGGCGCTGCACCCG
CTCGAGCTCGCCAGGCAGATCACGTTGCTGCACTTCCATCTCTACAGGCAGGTAAAACCA
TCCGAGCTGGTCGGCGCCGTGTGGACGAAAAAAGACAAGGAGAAGACTAGCCCTAACCTG
TTGAAGATTATAAAGCATACGACCAACTTCACGCGCTGGATGGAGAAGTGGATAGTGGAG
AGCGAGAACCTGGAGGAGCGCGTGGCGGTGGTGTGCCGCGTGCTGGAGCTGGGCGTGGCG
CTGCTGCACCTCAACAACTTCAACGGCGTGCTGGCCGTCGTAGCCGCCGCCGGCAGCGCC
TCCGTGCACAGACTCCGGGCCACCTTCCAGTTGATTCCTCTCCGCCTGCAAAAATACCTC
GAGGAGCTCCGGGAGCTGAACACAGATCACTTCCGGAGATACCAGGAGAGGCTGAGGAGT
ATCAACCCTCCGTGCGTCCCCTTCTTCGGCATGTACCTCACCAACATCCTGCACATCGAG
GAGGGGAACCTGGACTACCTTCCAAATTCCGAATTAATAAATTTCTCGAAGCGAAGAAAA
GTGGCGGAGATCACGGGCGAGATCCAGCAGTACCAGAACCAGCCCTACTGCCTCACCGTG
GAGCCCAGGACCAGGGCATTCCTGGAGTCGCTGGACCCGTTTCCCGGGAAAGACGACATC
GAGATCACAAATTATCTGTACAACAAAAGTCTGGAAATAGAGCCCCGGCCGCCGGTCAAA
CAGATGCCGAAGTATCCCAGGAAGTACCCGGACCTGTCGCTGAAGCAGGTGAAGGCCAGC
CGGAGGAACCAGCACGACCACTCCACCTGCGACGACAACCTCAGCGTGTCGCAGCTGTCC
CCCACGGGCAGCTCGTGGGACGGCGCGTCGGTGGCGTCGCTGCCCATGCACCACGACGAC
CACAGAGGCGGCAGGGCGGAGGCCGGCAGCCCCAAGGCCGACGCGCGCTCGCTCAGCCAG
CTCAGCCTCTTCGACAAGAAGCTCAGTCTGTTCGACAAGGGCAGGAGCCACAGGAACAGC
GAGCCGCCCTCCCCCAGGGACAAGCACTCCCCCAGGCACGACCGGCCGGCGCCCGTCGAG
AGAAAACCACAGAACTTATCGCCGCGGAACCCCATCGTCGACGCCGACTCCTTCTACACG
AGCCGACACAGCCTCGAGCTCGGCGCCAGGAAGCACGAGAGTAAAGAGGAGAGCGTGCCC
CCCCTTCTGCCGCGACACAGCGAGCCACCCCCAGCCCCGCCGCGCCGGATAGACACCCAC
CATGCGGCGCCGGGCGAGCAGCCGCCGGAGCCCCCGGACCGGCCGCAGCCCAGCCCCCAG
CACTGCGAGCTCCTCAGAATGCCAGCCTTGTCGCCGAAGAGATCTCCAGCGCCGCAGCCG
CCGATGAGCCCGCCCGCGCCGCCCGACAGGGGCGTGTTCAGCTTCCCCTGCGGACCCCCC
ACCCCGTCGCCCCCCG
(4096 bp)

- SilkBase 1999-2023 -