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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38699_c0_seq3
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		PREDICTED:_microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:1.71 TPM:1.35
ORF EntryO_BomoMG11396_complete:A_BomoMG_comp38699_c0_seq3
Sequence
(Nucleotide)
CGCTAATCATAATTAATGAGATTATTTTTGATTTGAATTCATTATCTTCTATATATTATA
TAAAAATGGAGTTTGTATATTTGTCCTATGTGCGTTCCCAAACCATCGGTCCGATTGTGA
CCAAGCTTGGTACCCTCGTCGGCACCGTGGCCGCGCAATGCTGGCTTCAAGAAATCGATG
GTTTTCACACGACCACGGCGTGCCCGGGTGCCGCTGGTCGTGAATAAAGTAATGTTGGAT
ACTAATTTTTTTGTGGTCATTGTCCGATTTTCCTCAAGACATCAACGCCCCGCTCTTGTG
AAACTGTCGTAGGGGTGGCTACTCTTGCGCTCCTTCATCCTGACCCGGGACAGAAGGGCC
GCGGTCAGCACCACGACGCGCGCGCCACCCGGACACGCCGTGTTGAGGTGGTAATATGTT
GCCAACGTATTGCAATATTATGTTCTAACGTATTGTACAATATTATCTAGACTTAAAAAT
AGGTGGCTCGACTTGAACAATGAAAATAAAACTAAGTATATAGAGCCCTAAGCAGATGAT
TTAACTAACATTATTTAAAAAGTTGTGTCATGTCGATAGAGATGTAAGTAACGCCATCTG
TGATGCCGAAGAGACTAGTACTACAGTACTACCGTTGAAGTTCTGGAAACCGTAGAACCG
TCGTGTCGGGAGCGCGGGGGCACACGCCCAGCTGTCGGAACTCACTTCTACTCGAAGAGA
TGCAGCGGACGAAAGTGGACCATGAGAGTCGTAATAATCAAATTCGAGTCTTAATTTGTA
TTTCGGTGAGAGTTTTTACTCATCCCGAGCCCCAGCGCAACACGCCTGCACCGAGGAGGC
TGGCAGGGCGCGTGCCGCAGCTCGACCGCCGTGCACAAGTAATCGACACAATTAATTTAA
CGACAGCTTCATTACGGAGACACGGGCCCGCGCGCTGCGGACACCCAGAATACGTTTGTG
CCGGTCCTTGGGCCTTCTCACCCCCTCGCATGTGGGGGCGCGCACCGGTGGCGGCATTAC
CAGGGTTTGTTTTAACAATAAATTAAAAAAGTTTATTATTTACACAAATAATTGCTGTTG
TTTTGGGACTTTTTTTTGGGGTTGAATTATGTTTTCATTGAATTAATCAAAATCAGAAGA
GGAAATTGAATAATTATATAGCCAGCAGTCGTCTGCGACCGGAGGTGGCGCCCCCCGGCG
GCAGCCCCCGCGCGCACAGTATTGTTTCTACTTATTACTTATGTAGAGGGTGCCAGGGCA
CGTGAAGTCGCTCAGAGCTCGACGTTGTTGAGGTTGGAGGCGGAGTGCGAGGGCAGGTCG
TCGGCCAGCAGCAGCGTGCCGATGGGCACCACGGCCGCGTCGCGCTCCCGCAGCTTCCGC
ATCTCGTTCCGCAGCTTCTCCAGCACCGCGTAGTTGGGCTCGTTGTGGCGCGCCTTGTCC
TGCAGGAGCGTGATCTGCTGCTCCTCTAGCTTCTTCTCCTTGCAGCTCTTCACGGACCGC
GAACCATACAGCCGCAGCAGTGAGCCCCACGAGCGCACGTGGGGGTGCAGAGCCTGCAGG
ATGGACTGCGACGCGCGCTGCTTGGCCGTCTTCTTGTTCTTGCAGACCACGGTGGCGGTG
TGCTTGCCCACCTTCATCGTCAGTTCAATCTTTTGGTTTTCAAACTTTTTCATCTCGGTG
TGCACGTGCCGGTCGCCGGCGCCGAAGTTCCTGAGCAGGCAGGTGCGCAGGATGGCGTGC
GGCGAGGGCTCGCAGGTGGCGGCGCAGAACTCGGCGATGCGCGGGTCCTCGATGCCGACG
TAGTCGAAGAAGGTGAAGTCGGGGTCGGCGTCGCGGCGGCGGCCGTCCAGCTCGTCCTTC
ATCTCGGGGATGAGGATGTGGATGGAGGCGCGCGCGGCCGCCGACTTGGCCTGGCGCTTG
CTGGAGCCGCGGCCCACGCCGTACTGCATGCCGCCGATGTACACCGTGGCCTGGTAGGGC
GTGGCGGCGTTCTCCAGCTGCTTGAACTCGTAGACGGGCTGCTTCTGCAGGGCGCGGCCC
ACGTACTCGTGGAACACGGCGAGGTAGCTGCGCCCGTCCATGTTCATGACCCAGTCGCGC
TTGGTGGACTTGCCGCCTGCTCGCAATGCAGCCGTCAGTGGCAGCGTTAGTTCGTCGCTA
ACTACTTCAACTTATATTTTTTGCCACGAAATTAAAGACAAATGAATTATGCTCAAACAC
AAAATAAATTACAGAAATTATTTTTACATGTGTCTTATGTGG
(2262 bp)

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