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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38655_c0_seq6
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_5-A-like_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:3.32 TPM:2.63
ORF EntryO_BomoMG11303_complete:A_BomoMG_comp38655_c0_seq6
Sequence
(Nucleotide)
CTTTTGTAATGATTTATGAAAGGAAATAATCTAATTACGATCACAGAATTTTCAAGTGTA
GTGCACTTTATTAAAGTAAATAATTTAACATCCGGCCTAAAGTGTTAAGATACTAGGGAA
GTTACTCGTAATTACGTTACAGCAGGTAAACGCTACGATGTCTTGGCGAAGTCGAGAGGA
GCGCTGCTCGAGGTGGGACACCAACAAATGGGAACTCCGCGATCGGTCGCCTGTATGGGA
GCCTAGGAACGTCAGCCCTGAGTGCAGGTCGCCATCCCGACACCGACACTCGCATGATAG
ACGGCCTCGTCACGAGCGCGACTTTCGGCGTGACCGCCACGACCGGGATCGCGACCGTGA
CCGAGAACGCGACAGAAAACGGTACGAGGAAGCGCCCGCGCCCCCCTCGCCGCCCGTCAT
CAGCGATGACAAAAAGAGCTCACGGTCTAGTAGTCGATCCGATAGTCGTGAGAGGGACAG
GTCTGATATGGAAATAGAAAAGGACAAGCACCAGGATGAGGTGCAGAACAACGCATCACC
GGGTGATTGGATCTGCAAGTGTGGTCTATACAACTTTAAAAGACGTCAGGTCTGTTACCG
TAGAACTTGTAATGGGAAAAGATCGGAGGGTGTAGTTTATGGAGGTGATGGGGATCGTAA
CGGTGTAGTCGAAACACCTGGCATCACAAAGAGGTTACTCTTTAGGAGGCTAGATGCTTT
GACTACTGAAGAAAATATATTGGAAGAGCTTAAACTACGTTGCAGTAAAGAAGTTCTAGA
GTTAATTGTAGGTATTTCAATTGGTAGAGAAACTTTAACAGGTGCATCAAAGTGTCTCGC
CTACATCAATTTCAACTCCATAGCAGATTCTACAACAGCACATACAGAGTTGGTGAATCT
CCAACCACCATTAAGGATTGACGGTCGAGAAGTGCTTATAAGCTTTTACAATGAACCTAA
AAAAATTGTTAAACCAACACAAGTTGACTATACGTCATACTACTCTCAAATGTCTTCGTA
CAGTGGTGCAACAACTCAAGCAATGTCTGAGGCTGATCGAGTCAATGCAGCTGCTGCAGT
AGCTCAGTCTGCTATATCGGCAGCCCAGGCTAGACAGCTATCATGGACGCCAGTTGGTGC
TGTACCTTTCACTGGTACTACCCAAACTACAAAAACAAATGTACCCATAGGTGATGGGAA
GACAGTTTATCCTGCCCCAGATGTGAGAACATTCATGTATGATGAGTCATCTGGTTACTA
TTATGACCCGTCAACTTGTTTATACTATGATGGGAAGACACAATATTTTTATAATAGTCA
AATCAGTCAATATATGTATTGGGATGGTAAAACAAACACTTATATTGCTGCAACACAGGC
TCAGAATGCTGAACAAAACAAACAAAGAGAGGCCAAGGAGCCTGATGAAAAGAAAAGGAG
AGACAAAGAAGACAAAGTTAAAGTAGCTAAAAAGATAGCTAAGGATATGGAAAGATGGGC
ACGGACTCTAAATCAAAAGAAAGAGAATGCTCGGAGTAACTTTGTTATGGAACAGCCAAC
TGACACAAGTGCTAGCAAAGGCTCAGCAGACATTGGTTTTTCAGTACTAGGAGCTGGACC
ATCATTAACTCATGTAAGAGAAATATCCCCACCTCCCAACACAGATGAATTCTTGGTCAA
AAAGATCTCAGAACCAGTATTTGATAATGATGATGACATTATTGACTGGGACAAATTAAC
CTGCTTGTTATGCAAAAGGAAATTCCCTTCTGTAGAAGTGTTGAATAAGCATAAAGTTAT
GTCAGACTTGCACAAACAAAATCTAGTTGAATTTAGGAAGAAGAATGACTTGATTCCACA
GATGAATGGTTATAGAGACAGGGCAGCTGAGCGACGTATGAAATTTGGTGAAGATGAGCC
TCCAATGATAAGAAAACGTTATGAGCCTTCTGAACCAATAGGTCCACCCATTAACCCGCA
CCCACCTCCAAATGTAGTAGATACAATAGGAGGTAAAATGCTGCAAAAAATGGGCTGGTC
GGAAGGTCGAGGTTTAGGTAAGACTGAGCAGGGACGAATAGCTCCCATAGAAGCAGAACA
GAGGCCAAGTTTAGCTGGTCTGGGGCAGAAAAGAGGTATATACACTCCCACACCTGGTGA
AACATATCGCGATACAGTTAAGAAACTTATGATAGCAAGATATAAAGAAGTTGTTGGACA
AGAAGAAGGGAAATAGGTGGGTATTTTTCATTTTGTCTTAAAAATTAATGTTTCTTTTCA
GTTCAGGAAGGAGCTGCAGGTTAGTCGTTGTCATCCTCAAAATTAACCAGTTTTTTTAAA
TAATTAGAAAACTAATCTTCCTGTTGAAAATGTTACTGGTTGGAATTAATTTACATTTAT
TTTTATTATTTATTGCTTTGATGAGTGGACGATCCCACAGCT
(2442 bp)

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