SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38655_c0_seq5
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_5-A-like_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.75 TPM:0.59
ORF EntryO_BomoMG11301_complete:A_BomoMG_comp38655_c0_seq5
Sequence
(Nucleotide)
CTTTTGTAATGATTTATGAAAGGAAATAATCTAATTACGATCACAGAATTTTCAAGTGTA
GTGCACTTTATTAAAGTAAATAATTTAACATCCGGCCTAAAGTGTTAAGATACTAGGGAA
GTTACTCGTAATTACGTTACAGCAGGTAAACGTGAGTAAAAGCTACATTGAAAAAGAAAG
CCACGCATTGCGCAGCAACCATGGCGGAGACAGGAATCATCAGTGAGTATAAGTATCTGA
TCGTGCGGGGTGTTCGCAGGCTACGATGTCTTGGCGAAGTCGAGAGGAGCGCTGCTCGAG
GTGGGACACCAACAAATGGGAACTCCGCGATCGGTCGCCTGTATGGGAGCCTAGGAACGT
CAGCCCTGAGTGCAGGTCGCCATCCCGACACCGACACTCGCATGATAGACGGCCTCGTCA
CGAGCGCGACTTTCGGCGTGACCGCCACGACCGGGATCGCGACCGTGACCGAGAACGCGA
CAGAAAACGGTACGAGGAAGCGCCCGCGCCCCCCTCGCCGCCCGTCATCAGCGATGACAA
AAAGAGCTCACGGTCTAGTAGTCGATCCGATAGTCGTGAGAGGGACAGGTCTGATATGGA
AATAGAAAAGGACAAGCACCAGGATGAGGTGCAGAACAACGCATCACCGGGTGATTGGAT
CTGCAAGTGTGGTCTATACAACTTTAAAAGACGTCAGGTCTGTTACCGTAGAACTTGTAA
TGGGAAAAGATCGGAGGGTGTAGTTTATGGAGGTGATGGGGATCGTAACGGTGTAGTCGA
AACACCTGGCATCACAAAGAGGTTACTCTTTAGGAGGCTAGATGCTTTGACTACTGAAGA
AAATATATTGGAAGAGCTTAAACTACGTTGCAGTAAAGAAGTTCTAGAGTTAATTGTAGG
TATTTCAATTGGTAGAGAAACTTTAACAGGTGCATCAAAGTGTCTCGCCTACATCAATTT
CAACTCCATAGCAGATTCTACAACAGCACATACAGAGTTGGTGAATCTCCAACCACCATT
AAGGATTGACGGTCGAGAAGTGCTTATAAGCTTTTACAATGAACCTAAAAAAATTGTTAA
ACCAACACAAGTTGACTATACGTCATACTACTCTCAAATGTCTTCGTACAGTGGTGCAAC
AACTCAAGCAATGTCTGAGGCTGATCGAGTCAATGCAGCTGCTGCAGTAGCTCAGTCTGC
TATATCGGCAGCCCAGGCTAGACAGCTATCATGGACGCCAGTTGGTGCTGTACCTTTCAC
TGGTACTACCCAAACTACAAAAACAAATGTACCCATAGGTGATGGGAAGACAGTTTATCC
TGCCCCAGATGTGAGAACATTCATGTATGATGAGTCATCTGGTTACTATTATGACCCGTC
AACTTGTTTATACTATGATGGGAAGACACAATATTTTTATAATAGTCAAATCAGTCAATA
TATGTATTGGGATGGTAAAACAAACACTTATATTGCTGCAACACAGGCTCAGAATGCTGA
ACAAAACAAACAAAGAGAGGCCAAGGAGCCTGATGAAAAGAAAAGGAGAGACAAAGAAGA
CAAAGTTAAAGTAGCTAAAAAGATAGCTAAGGATATGGAAAGATGGGCACGGACTCTAAA
TCAAAAGAAAGAGAATGCTCGGAGTAACTTTGTTATGGAACAGCCAACTGACACAAGTGC
TAGCAAAGGCTCAGCAGACATTGGTTTTTCAGTACTAGGAGCTGGACCATCATTAACTCA
TGTAAGAGAAATATCCCCACCTCCCAACACAGATGAATTCTTGGTCAAAAAGATCTCAGA
ACCAGTATTTGATAATGATGATGACATTATTGACTGGGACAAATTAACCTGCTTGTTATG
CAAAAGGAAATTCCCTTCTGTAGAAGTGTTGAATAAGCATAAAGTTATGTCAGACTTGCA
CAAACAAAATCTAGTTGAATTTAGGAAGAAGAATGACTTGATTCCACAGATGAATGGTTA
TAGAGACAGGGCAGCTGAGCGACGTATGAAATTTGGTGAAGATGAGCCTCCAATGATAAG
AAAACGTTATGAGCCTTCTGAACCAATAGGTCCACCCATTAACCCGCACCCACCTCCAAA
TGTAGTAGATACAATAGGAGGTAAAATGCTGCAAAAAATGGGCTGGTCGGAAGGTCGAGG
TTTAGGTAAGACTGAGCAGGGACGAATAGCTCCCATAGAAGCAGAACAGAGGCCAAGTTT
AGCTGGTCTGGGGCAGAAAAGAGGTATATACACTCCCACACCTGGTGAAACATATCGCGA
TACAGTTAAGAAACTTATGATAGCAAGATATAAAGAAGTTGTTGGACAAGAAGAAGGGAA
ATAGGTGGGTATTTTTCATTTTGTCTTAAAAATTAATGTTTCTTTTCAGTTCAGGAAGGA
GCTGCAGGTTAGTCGTTGTCATCCTCAAAATTAACCAGTTTTTTTAAATAATTAGAAAAC
TAATCTTCCTGTTGAAAATGTTACTGGTTGGAATTAATTTACATTTATTTTTATTATTTA
TTGCTTTGATGAGTGGACGATCCCACAGCT
(2550 bp)

- SilkBase 1999-2023 -