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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38655_c0_seq4
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_5-A-like_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.53 TPM:0.42
ORF EntryO_BomoMG11299_5prime_partial:A_BomoMG_comp38655_c0_seq4
Sequence
(Nucleotide)
GGGAACTCCTCGAGCAGGTAAACGCTACGATGTCTTGGCGAAGTCGAGAGGAGCGCTGCT
CGAGGTGGGACACCAACAAATGGGAACTCCGCGATCGGTCGCCTGTATGGGAGCCTAGGA
ACGTCAGCCCTGAGTGCAGGTCGCCATCCCGACACCGACACTCGCATGATAGACGGCCTC
GTCACGAGCGCGACTTTCGGCGTGACCGCCACGACCGGGATCGCGACCGTGACCGAGAAC
GCGACAGAAAACGGTACGAGGAAGCGCCCGCGCCCCCCTCGCCGCCCGTCATCAGCGATG
ACAAAAAGAGCTCACGGTCTAGTAGTCGATCCGATAGTCGTGAGAGGGACAGGTCTGATA
TGGAAATAGAAAAGGACAAGCACCAGGATGAGGTGCAGAACAACGCATCACCGGGTGATT
GGATCTGCAAGTGTGGTCTATACAACTTTAAAAGACGTCAGGTCTGTTACCGTAGAACTT
GTAATGGGAAAAGATCGGAGGGTGTAGTTTATGGAGGTGATGGGGATCGTAACGGTGTAG
TCGAAACACCTGGCATCACAAAGAGGTTACTCTTTAGGAGGCTAGATGCTTTGACTACTG
AAGAAAATATATTGGAAGAGCTTAAACTACGTTGCAGTAAAGAAGTTCTAGAGTTAATTG
TAGGTATTTCAATTGGTAGAGAAACTTTAACAGGTGCATCAAAGTGTCTCGCCTACATCA
ATTTCAACTCCATAGCAGATTCTACAACAGCACATACAGAGTTGGTGAATCTCCAACCAC
CATTAAGGATTGACGGTCGAGAAGTGCTTATAAGCTTTTACAATGAACCTAAAAAAATTG
TTAAACCAACACAAGTTGACTATACGTCATACTACTCTCAAATGTCTTCGTACAGTGGTG
CAACAACTCAAGCAATGTCTGAGGCTGATCGAGTCAATGCAGCTGCTGCAGTAGCTCAGT
CTGCTATATCGGCAGCCCAGGCTAGACAGCTATCATGGACGCCAGTTGGTGCTGTACCTT
TCACTGGTACTACCCAAACTACAAAAACAAATGTACCCATAGGTGATGGGAAGACAGTTT
ATCCTGCCCCAGATGTGAGAACATTCATGTATGATGAGTCATCTGGTTACTATTATGACC
CGTCAACTTGTTTATACTATGATGGGAAGACACAATATTTTTATAATAGTCAAATCAGTC
AATATATGTATTGGGATGGTAAAACAAACACTTATATTGCTGCAACACAGGCTCAGAATG
CTGAACAAAACAAACAAAGAGAGGCCAAGGAGCCTGATGAAAAGAAAAGGAGAGACAAAG
AAGACAAAGTTAAAGTAGCTAAAAAGATAGCTAAGGATATGGAAAGATGGGCACGGACTC
TAAATCAAAAGAAAGAGAATGCTCGGAGTAACTTTGTTATGGAACAGCCAACTGACACAA
GTGCTAGCAAAGGCTCAGCAGACATTGGTTTTTCAGTACTAGGAGCTGGACCATCATTAA
CTCATGTAAGAGAAATATCCCCACCTCCCAACACAGATGAATTCTTGGTCAAAAAGATCT
CAGAACCAGTATTTGATAATGATGATGACATTATTGACTGGGACAAATTAACCTGCTTGT
TATGCAAAAGGAAATTCCCTTCTGTAGAAGTGTTGAATAAGCATAAAGTTATGTCAGACT
TGCACAAACAAAATCTAGTTGAATTTAGGAAGAAGAATGACTTGATTCCACAGATGAATG
GTTATAGAGACAGGGCAGCTGAGCGACGTATGAAATTTGGTGAAGATGAGCCTCCAATGA
TAAGAAAACGTTATGAGCCTTCTGAACCAATAGGTCCACCCATTAACCCGCACCCACCTC
CAAATGTAGTAGATACAATAGGAGGTAAAATGCTGCAAAAAATGGGCTGGTCGGAAGGTC
GAGGTTTAGGTAAGACTGAGCAGGGACGAATAGCTCCCATAGAAGCAGAACAGAGGCCAA
GTTTAGCTGGTCTGGGGCAGAAAAGAGGTATATACACTCCCACACCTGGTGAAACATATC
GCGATACAGTTAAGAAACTTATGATAGCAAGATATAAAGAAGTTGTTGGACAAGAAGAAG
GGAAATAGATTCGACCTGGAATTCTAC
(2127 bp)

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