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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38595_c0_seq1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_transcription_initiation_factor_TFIID_subunit_2_[Papilio_xuthus]
Ontology
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0001129 F obsolete RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005669 C transcription factor TFIID complex
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006508 P proteolysis
GO:0007221 P positive regulation of transcription of Notch receptor target
GO:0008134 F transcription factor binding
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0022008 P neurogenesis
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0046427 P positive regulation of receptor signaling pathway via JAK-STAT
GO:0051123 P RNA polymerase II preinitiation complex assembly
GO:0060261 P positive regulation of transcription initiation from RNA polymerase II promoter
Transcript
Level		FPKM:6.77 TPM:5.35
ORF EntryO_BomoMG11174_complete:A_BomoMG_comp38595_c0_seq1
Sequence
(Nucleotide)
TATTGTGACATCCCAGATTTGTCCTTATTCCCCCCAATCTACTGTACTCATTACAATTAA
TCTTATCTTCTATAATTTAAATCTTCAAAAACTCATATTGCCCTGCGTGCTGGAGATATC
TTCAGAGGGACTTTGACTCGAGCTGAAAGAGCTGAGAGTCTCACGGGTCTCCTCTTTAAT
CTTCAGATGGTCGGTGCCGAGGGGCAGGCTCGGGGGCAACGACCTGTCCTTGTGCTCTTT
AGACTTATCTTTGCTGCTGTGCTTGTGTTTATGTTTGTGTTTGTGCTTCTTTTTCTCTTT
CTTCTTTTTCTTTGCCTTAGGGGCTCCGAGCTCATCCTTCAGGGGCCTGAACATTCCAGG
TTCGAAGCCGATGGGTCCCGAAGTCCCCGGGATACCGGGCAGAGCCACAGCATTATCTGA
ACTGAATTCTCGTTTCGAATCATCATTAAAAACTCTTAAGGGAATTTCAGCGGAAACTGT
CGTTACGTCAACCTTCACGTCCTCCTCTTTGATACTGGACAGCGGAACCGGAAGCACGTT
CTCATCTGTGATGTCCATTTTATTGTCCAATAGCGATGTACTCGTCATTGGACCAATCGT
CGAATCGTATTTCACGTCATCAATCTCCTGTTTGATCACGGGCTTCAACTCCAGATTGCT
CTGTCTCTCCCTCTCCCTTTCCTTTTCCCTCTCCCTTTCTCGTTCCCTCTCGAGGCGTTC
TCGTTCTTTTTGATGGTTCTGCTTTATCATCGCTTGTATTTCGGGTAGCGGACAGCAAAT
AGGACGTTTAGCGCCGTACAACGTGTAATACAGGTCCACAAGGTCGCACCGGAGACGAGC
GTCGTTCGACAAATTACTGTTTATATTGTTCCATATTCTGTGCACCACCGTCTCGGAGTC
GAGGCGGTGCCTCTGCGCGCGCTCGAAGGGCGGCGTGTCGACGAGCAGGCGCGCCAGGCC
GTGCCGCACGCCCGGGTCGGGGTCGCTCTCCACGGCCGTCAGCAGCGACGCCAGGTCCTC
CGGCTTCCCGTCCACTCGGACGAACTCGACCAGGCACTCGAAGGCCGCCAGTCGCACATC
AATGTACTGTCCGTACTGCGCATAGGCCCTGAATATCATGGGCGTGCTGGGCAGGTGGCC
GCACTGCTGCAGGCGGCGGATGGCGCGCAGGCAGCTCACCGTCACCGTGTTCTTGTAGCA
CGGCAGCACCTTCTCCAAATTCAGGACCCGGGTTATCTCTTCCAGGACCAGTCTGGAGTC
CGCCGACAGGGAGTCTGCCGTTATCGGCGCGCCGGGTTGCAGCACGGATATGACTGGAGT
GATCGTGGCAGCGAGAGCGTCCACCAAAGCAGCTCTGTAGTAGTTATCAGAGAAATGATT
CTTCGAATTGTCGTTGTACTTGAAGAGATCTAAGAGGAATTTCACGACTTCCGGTGGACA
GATGCCGTGGATGTTCCGGAGACCAGCCATGGTGACCGGTATAGTCTTCTGCAGGAAGTA
ATGCTGCAAGTTGTCGAAGTTGTTCTGCTTTATTATATGCGGCGCGGAAAACGAACCGAA
CATTTTGCGGAAGATCGTCAACATCGCCGGCGGACCCGCCCATGAACTTATCATTGCATT
CGCCACCTTTGTCAAGCAATGCGCTGCCCTACACCGTATCTTATAGAACGTCTGTTCGTT
CTCAATGGTGTCCGTGAGAGCCTTCCTCGTGGCCGGCTCGGGGAACGTGTGCAGCGCGTC
TATGGCCTCGCTCTGCGCGGTGACGTCACGCTCGTGACGCAGCTGGTACTGCCACTGGTA
GTCCGGCTGCGATATTATAGTGCTACGCAGTAACGACATCTCCGGGTCCAGACGAATCCA
CAGTACAGGAGAATCGTCCATTGCCGACAAATCCATGTCTACTTCTTCTCCGGTGCACAA
AGGAATCTTCTTCTTCTTATTCCTCCGACTCTTGCTGTGACAAGTTATATCGGCTTTGAC
CACCGTATTCTCAATCTGCAATGTGTGCTTGAATGTACCGTCCAACTCTTGCAACTGGAC
GAGCAGGGGACCCACGTATTTACGTATACCGCGCTCGTGCACGCAGTCCTGTCGTATCTC
AAGTTCTACGGTGTTCCTTTTTCTATTAAAGACTGATGTCAATTGAAATTTGGCGTGCCC
TCCGGTCCTCACCCACTGGTCGACGAACACAGCCATATCTTTACCAGTCACCGTGAATAT
AGCTTTGACAAACAAGTTGGTCGATAGCAACAAGTGGCCCCATAGCCCACTCCCGATCTT
TGTATTGGCCGCATTGGTGGCCAACGCCAACTGCTTGTTAAATACTTGAAGCAGGAGCTC
TTGTCCAATACGCTGCTCCAACATTCGTAGTACCAAATGGGATTTTTTGCGCATAACTTC
AATATACCGCGGCGACATGGTATGAACATTGCGTACGGGGAAATAGAAGACATTGGGTTC
AATCCTGGTTCCACTAGCGGGCGGCTGCCACGGGTCTAAGACTATACCGCCATATTGTTC
TTCGTAACCCATCACCTCTTTCAACTCCTGATGTATCCAATACCGATAGGCGTTGTTCCC
GAAACATTTCTTGGAGTACAGTCCGCATAAATAGTCCGGTATACCTTTTGCTAGCCACAG
ATCTGACCAGTTCTGCATAGTTATAAAACAACCGAAAAACTGCTCGGCCACTGCTTGTGC
CATTGCCTTCCTGCTGATGTAAGTCTGGTCGATGATAGCAATCGAGTGTAGCAGGTGAGT
GCTTAATATCGAAATAGTTGTGTAAGCAGTTGCGTCATCTTCTGTCTCATCAACAAAAAC
TTGTTTGTAACAGGGATATGGATATCGAGTTGATAATGTTTCTTCATAGAATTCAAATGC
CTCATGCAAATATCTTACGGTGTTCTTTAATATTTGTAGCAAATTTGGTAAGCAATAATG
TGTTACTTCATTCATGAAAGGATCAACATAAGTTTCAAATGGTCCAATAGCCAATGCTAT
GTTTGGTGCGCAAGCTGGAGTATTCACTAAATAATGAAATGTTTTCCTCCTATGATCAGG
TGTATAAATAACATCTACTAGTTCTCCACATGAAACAGCTGTGAGGCATTCATCAACAGT
GAATTCCAGTTTCCAAGTGCAAGGCTCAGCAAAACTATCCACACATGGGAACCATAGTCG
AGCAGAATGTCCATATGTAAACATGTGCGCTGATTTCTCTGTCAAAGTACCTTCTCCCTC
AGGTACAACAAAATGCATGCCCCCTTGGGGAGATTCAAGTGAAAATTCAATACCAATTCT
GAGCCCTCGGCCTTCACCAACTAAGTGAGCTGCTTCTTCAGGTATTTGAATGTGAAGTTC
TCCTGAGTTATGGTCAGGGTCTGTCTTCTGTGCTGCAGTTAAATGATACTGAGAGAATGC
TTCCAGTGATCTCGTATTTGGATCGGCTTGACATATATCCAGAAATGGGTCAAAGTACTG
AAAATTTGCTTCATATTGATCATTTAAGCACACTCTATATATTCGAGATTGCTTCGCATT
TAGACGAATGTAGCGTAAGTTATCCTTAAGGGGAACGACAGTAAGTTCCACAAATCCAAT
AACGCTTCTTCTTTCAAAGCTTATTCCCGTTAAACTCAAAATTTGATGAGCTAATTTAAA
TGGGCGACAATTGTCGCCCGTACGTTCTTTTTTCATGATTTCATGTGAACAGTTTTCCTC
TTATATCGATTATGTTCACGACTTAAAATTATTTATACATTTTAATTCCCAATTTATGAA
GACTACAAATAATCCCATATAAACAACAGTTTATCAAGATTGTTGGTGGTTATTCAGAAT
TTAGAAGCAACAAAATTT
(3858 bp)

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