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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38589_c1_seq1
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_ubiquilin-1-like_[Amyelois_transitella]
Ontology
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0006914 P autophagy
GO:0016020 C membrane
GO:0016235 C aggresome
GO:0016241 P regulation of macroautophagy
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0031398 P positive regulation of protein ubiquitination
GO:0031410 C cytoplasmic vesicle
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0035973 P aggrephagy
GO:1901340 P negative regulation of store-operated calcium channel activity
GO:1903071 P positive regulation of ER-associated ubiquitin-dependent protein catabolic process
GO:2000785 P regulation of autophagosome assembly
Transcript
Level		FPKM:40.07 TPM:31.66
ORF EntryO_BomoMG11163_internal:A_BomoMG_comp38589_c1_seq1
Sequence
(Nucleotide)
ATACAAGTCAACGCTATTCGTCAATTTGTCTTTCTCGTATAAATTTTACTTTTCCGCCAA
AGTACATAGTCATTCTAGAATTGCCAAAATGGCAGAGGGACAAGACGACCCTAAAAAAAT
TACGATCACAGTTAAAACCCCGAAAGAGAAGCAGCAAGTTGAAATTGAGGAAGATGCCGA
TATCAAAAGACTCAAAGAAGTGTTGTCTTCAAAATTCAGTACAGAACCAGAACAATTATG
TCTTATTTTCGCCGGGAAAATCATGAATGATGCCGATACCCTGAAGCAACACAACATCAA
AGATGGGTTGACAGTGCATCTAGTGATTAAAGCTCCTCCAAGACCAGAACCGGAGGGTGC
GGCTCGTAGACCCCCAGCTGACGTCAGTGCTACACCATTTGGTTTAAACTCGCTGGGTGG
GCTGGCGGGTCTTGAAAGCTTGGGCCTTGGTCAGAGTACTTTTATGGATCTCCAGGCTAG
AATGCAACAGGAACTTCTGTCCAACCCTGATATGCTCAGACAAGTCTTAGACAATCCATT
GGTGCAGCAGATGATGAATGATCCTGAGAATATGCGTAGCCTCATCACCTCCAACCCACA
AATGCAAGATCTCATGTCTAGAAATCCAGAAATCAGTCATATGTTAAACAATCCTGAATT
ATTACGTCAAACTATGGAGTTGGCTCGCAACCCCGCTATGTTGCAAGAGTTGATGCGCTC
ACACGACCGCGCCCTCTCCAATCTCGAAAGTATACCAGGTGGTTACAATGCGCTCCAAAG
AATGTATAGGGACATACAGGAACCGATGCTCAATGTGGCCAGTAGCATGGCAGGGAACCC
TTTCTCTGGACTCGTAGACAATTCTGACGGCACAAACCCGCAGCAAGGATCTGAGAACAG
GCAGCCGCTACCCAACCCGTGGCAGCGTGGTGGAGGAGGAGGCGGCGGC
(949 bp)

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