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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38566_c0_seq2
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		PREDICTED:_CCR4-NOT_transcription_complex_subunit_11_isoform_X1_[Papilio_machaon]
Ontology
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0006977 P DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0008283 P cell population proliferation
GO:0030014 C CCR4-NOT complex
GO:0031047 P gene silencing by RNA
Transcript
Level		FPKM:2.11 TPM:1.66
ORF EntryO_BomoMG11101_5prime_partial:A_BomoMG_comp38566_c0_seq2
Sequence
(Nucleotide)
TAAATCGCGGCACGTATATACCGATGTATGACTCCGACTACGACGGACTGATCGGGCTCC
GACCTGAGAAGATCGATAGAAGATCGCAGCCTAACCAACAGCACAAAGTCAAGGAGGAAA
AAAAAGAGAAACAAGAAGAGAAGAAGGAAGATAAAGATCCTGTGTCATTAGTGAGTGAAG
CTAAAGATTTGACCCAGATCGCGCTCAGGGGAGCCCTCAGTGTACAGCAACAGCAAAGAC
TACTGGCACTGCTGGATCAGGAACCTAACATTGTCTACGAAATAGGTGTTACACCTAACC
AGCTACCGGACCTAGTCGAGAACAATCCAATGGTCGCCATATCGGTGCTTCTCAAACTGA
TCCACTCTCAGCACATCACGGAGTACTTCAGTGTCCTCGTCAACATGGAAATGTCGCTGC
ACTCCATGGAGGTGGTCAACAGGTTAACGACCTCAGTGGATTTGCCGGTGGAGTTCGTTC
ACCTCTACATAAGCAATTGTATTTCGACGTGTGAGACAATACGGGACAGATACATGCAAA
ACAGGCTCGTACGATTGGTGTGTGTCTTCCTGCAGTCGCTGATAAGGAACAAGATCATCA
ATGTGAAGGAGCTATTCATAGAAGTGGAAGCGTTCTGCGTTGAGTTCAGCCGGATCCGAG
AGGCCGCTGCGCTGTTTCGGCTCCTGAAGCAGCTGGACTCCGGCGAGGCTGCCCACAAGG
ACCCCAAGGATAACTAGCGACGGCACAAGAGCAGGGTTTACTCGAACACGAATAGGTAGC
GCCGGCCTCACGTCTGGGACCCCAGCCAATCGGAGAGCTAACAGCTGACCGCACCGCTGT
GACATTGAAACTATAACAGTTCCACCGGTGATTACAATTGTGATGTGGCGTGTTAAACGT
TCAATAGTTTTGTGGATTAATTGTGTAATAAGCAATTGGAAACTTGTACACTCTAAGACC
TATTTTCTAAATTTGTGAAACTCGTGATATCTCGGGTATAAGACATTAGCCGGCAGCTGT
GACAGCTAGTTTTGAACCTAACAACTATTATAGCATCAACGAAATAATGTCCACTCTCAC
ACAAAAAGGTAATGCAGGCTCTATCAGGACCTACGTCTGTGAACATAACCGATACAATGT
TTAGTGCGTATAAAGTTATGGTAAATATCGAGTGTCTGTGAAAATTGTG
(1189 bp)

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