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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38555_c0_seq4
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_negative_elongation_factor_D_[Amyelois_transitella]
Ontology
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007070 P obsolete negative regulation of transcription from RNA polymerase II promoter during mitotic cell cycle
GO:0008023 C transcription elongation factor complex
GO:0017053 C transcription repressor complex
GO:0022008 P neurogenesis
GO:0032021 C NELF complex
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045892 P negative regulation of transcription, DNA-templated
Transcript
Level		FPKM:4.92 TPM:3.89
ORF EntryO_BomoMG11085_3prime_partial:A_BomoMG_comp38555_c0_seq4
Sequence
(Nucleotide)
TTAAAATGTTGTTTAGTTTGAAAAAAAAGGTTTTTTTCATATTTAATGAATATTAGTTGT
TTTAACTTTGATAATCAAGGGCCTCAGCATCATAAATTTGTTGTTTGTTTAAAGCTAAGT
TGAGTGCAACTTAATATACAACCATGCCTAGTCAGTATGAGGAAGAACGTGTATGGGATG
GTCAGAATCATAATAATCAATATGAAGAAGAAGGAAATGAAGATGTTATTGAGAACCCTG
AAGAGGTATTAAATGAATGTCTGGAAAAATTTAAAACTCCAGACTACATTATGGAACCTG
GTATTTTTGGTCAGCTTAAAAGATACTTCCAAGCTGGTGGAAATCCAGAGCAAGTTATTG
AACAACTGTCAATGAATTACAATGCTGTAGCTCAGATGGCCAACTTATTAGCTGAATGGC
TTATCCTTGGAGGAGTTAAAGTTAGTGAAGTCCAAGCTATGGTTGAAAATCATTTAAAAG
ACATGATTCTAAAAACATTTGATCCCAAAAAAGCTGATACAATATTCACTGAAGAGGGAG
AGACACCAGCTTGGCTTACTGAGATGATTGAACATCCTACTTGGAGATCTTTAATTTACA
GACTAGCCGAAGAATATCCAGATTGTCTAATGTTAAATTTTACTATAAAGTTAATTTCTG
ATGCAGGTTTTCAAGGTGAGATAACAAGCATATCAACAGCTGCACAACAAATCGAAGTAT
TCTCCAGAGTACTCAAATCAGCTATTGTGGGTTTCCTTCAAAGTTCAGATGATTGGCAAA
ACAGTGTTAATGAATGTGCTAAAATGGTTTGTCATGGCGCGCACACATACGTTTACAGTC
AAGTTATTGTTCACATTCTCTCACAAGAGCCAAGAGGTGGCGCTATTATGAAGAGGTTGA
GCCAGGAAATAACTCGTTGTGCTCAACAAGGTGGCCACGATGTGACCCCAATAACACTGG
CCTTGACCTCTGGTGAGAGTTGGCGCAACGCTCGGACGGCACTTGCAGCCATGCTATCGA
GGGGCGCCCTCAATCCGGCTGATATCTCGGTGTTGTTCCGCGCTTACACGCAACCAGACT
CGCCACCGGTTCATTTACTTAGGATACCACAGTTTTTGGAACTACTCGTTGATTCATTGT
TCAAATTGGGAAGCAAACTGAATCCGGAACACAAATCCAAATATATGTATCTTTTGGCAT
ACGCTGCTAGCGTTTGCGAAAGTCCGAGTCCCGGTAAACCTGTTAAAGACGAACTAAAGG
CCACTGTGCAAGCTATTGAAAAAGTACATGCCGTGTGCAGCAGCTCTGCTAGCTCCAGCG
AACTCATCGCCGAATTACCTACTCTATACCATTGTATAAGATTCCCCGTAGTCGGTATGG
GAGTTTTAGTTTGGGTGGAGTGTGTTGTGACCGAACCTTCGTATTTCAAACTCTGTACAG
AACATTGTCCTTTGCACCTGGCGCTATTAGACGAGGTCG
(1479 bp)

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