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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38549_c0_seq1
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_four_and_a_half_LIM_domains_protein_2-like_isoform_X3_[Amyelois_transitella]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001649 P osteoblast differentiation
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005925 C focal adhesion
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0009725 P response to hormone
GO:0015629 C actin cytoskeleton
GO:0042802 F identical protein binding
GO:0043066 P negative regulation of apoptotic process
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0055014 P atrial cardiac muscle cell development
GO:0055015 P ventricular cardiac muscle cell development
GO:0060347 P heart trabecula formation
Transcript
Level		FPKM:31.10 TPM:24.57
ORF EntryO_BomoMG11066_complete:A_BomoMG_comp38549_c0_seq1
Sequence
(Nucleotide)
CAAACATTCTGGAATAATTCTTGCGTTTCGGCTAGTGTTGCTCGCCATTCGAATTCGGGT
CGCGATCGCGTCCGGTGTTATCGTATCCTAGCTTATTGAAAAAAAAAAAAACAAATCGCA
CCATGGCCGACGTTGACGTTCAAGTCCAGTACACCACCACGGAACGCAAAACTAGGAAGG
TCAAGAAGACCTCCAAGCGTAGGGAGTCCAAGGACGGCGAGGTGACCGTCACCGAAGTAG
AACAGACCAACACCACCAATAACGACGATGGCGGTGAATACACCAAGGCCATGAACAAGG
ACTGGCATAGCGGTCACTTCTGCTGCTGGCAGTGCGACGAGTCGCTAACTGGCCAGCGCT
ATGTTCTTAGGGATGAACACCCCTACTGCATCAAGTGCTATGAAAGCGTCTTCGCCAATG
GCTGCGAAGAGTGCAACAAGATCATCGGCATTGACTCTAAGGATCTGTCGTACAAGGACA
AGCACTGGCACGAGGCCTGCTTCTTGTGCGCCAAGTGCCGCGTCTCTCTGGTCGACAAGC
AGTTCGGCTCCAAGCTCGACAAGATCTACTGCGGTAACTGCTATGACGCCCAGTTCGCAA
GCCGCTGCGATGGATGCGGCGAGGTGTTCCGTGCTGGAACCAAGAAGATGGAGTACAAGA
CCAGGCAGTGGCACGAGAAGTGCTTCTGCTGCGTTGTCTGCAAGAACCCGATCGGCACGA
AGAGCTTCATCCCGCGCGAGCAAGAGATCTACTGCGCCGGCTGCTACGAGGACAAGTTCG
CCACCCGCTGCGTCAAGTGTAACAAGATAATCACACAAGGCGGCGTGACGTACAAGAACG
AGCCATGGCACCGCGAGTGCTTCACGTGCACGAACTGCAACACGTCGCTCGCCGGCCAGC
GGTTCACTTCGCGCGACGAGAAGCCCTACTGCGCCGAGTGCTTCGGGGAACTGTTCGCCA
AGCGCTGCACTTCTTGCACCAAGCCCATCACAGGTATCGGCGGCACCCGCTTCATCTCGT
TCGAAGACAGACACTGGCACAACGACTGCTTCATCTGCGCGCAGTGCAAGACCTCGCTCG
TCGGCAAGGGCTTCATCACCGACGGACAGGACATCATCTGTCCCGAGTGCGCCAAGCAGA
AGCTCATGTAAATACACCTGTCTCGCTTCAACGCTTCCGCTCTCGCATCGCTCCATCCCT
CACACGCAATACAATTTATATATGACAAATGTTTTTGTGATGTGCAGCGAACATACCATA
CTACCGGTAGTCGCTAACGCCCGAGACTGGTGCGCGTTCAGAAAGCAGGACACCTCGAGC
GAAAAGATTTACGACATCACTGACAAATTTAACTTTCGCAAGGGCAGGGCCAACGTTAGT
ACGGTGCCCAAATAACGATATTTTTTTTATTTAATAAAAGTAAAAAATACACGAAAAATC
ACAAAAAAATAATTAATTAAAGTGAATGCACAAAATTGATTTAATTTGCTTTTCTATTGA
ATTTATTATCTATATAATATATTTATATAGACTGTTATCACTCAGATATTGATACTAATA
GTCGAATTTAATACGTATAATCTGTATTTATTTTATGTATGTATCGATGTGCTAACCGCC
ACGTTATTTCGCTTTGGCTGTTGTATTTAGTCCTAGATCTATATTGCGGCGCTGGATTCA
CACGATGCCTTAATAACATATCTAAGTCAATTTTGAAATTATTATGTTTTAATATAATTC
GTACCACCTTAATAAATGTGAATGTTGTGCCTCTAAATCTTGCCTTCCTTTCTATCAATT
CGAAAAACGAAGTGACAGAAAAGGACATTCGATTTTAACAACATTGTAATGTAAGAAGGC
ATCTTGGCTGGTGTTGCCAGATCTAAATTTTATTGTTCATCATTTATAATCGAACTTAGT
AAGAAGTGCTTGTCATATTGTAACATAGTGTGTAAGGAATATATTGACAAAGTATTAATA
TACTTGTTATATTTTAAGTATTTATTTATATACGGGAGTACGCACTTTTTATTCGAAGAG
ACGCCGATGGTGTTGCTGTGTCACATGTTATTTAAAAAATGAGATTTTAGATGTAATGTT
GCCATATACGCCATCGGAAGGTCGCCATCTAACACAGTAATTGTAAGTGACATTTAGTTT
TACTAATAAAATTAAAAAATATAATATTTTTGTTCTCGAATAAGTAATAAACTTGTTACG
ATATAATTGAATGTTATCAATATTTTTACAATGTTAAATAATATTTATTAGGGTGTAGAA
TCTTACAATAAGTGAGTAACATCTGTGTTAAAGAATATCACTAGCTGGATTGAGTCAACA
ACTAAAATGTTTGGGGAACACTTTATAAAGGTTACTTAATAAGGTTTTAAATTATTCGAA
ATGTTGAACTATTAATTTATAATGATAACTGCTTACATGTGTGATCTGATCTAATTAAAT
ACTTGTATCTACCCATAGATTGTAAACTGTGAAACTGAAATAAATTATCAAAAATAAAAA
AA
(2522 bp)

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