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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38524_c4_seq1
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		Dystonin_[Operophtera_brumata]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0005925 C focal adhesion
GO:0008092 F cytoskeletal protein binding
GO:0008307 F structural constituent of muscle
GO:0016528 C sarcoplasm
GO:0030054 C cell junction
GO:0030056 C hemidesmosome
GO:0030506 F ankyrin binding
GO:0031581 P hemidesmosome assembly
GO:0042383 C sarcolemma
GO:0043034 C costamere
GO:0043292 C contractile fiber
GO:0044822 F RNA binding
GO:0045111 C intermediate filament cytoskeleton
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:3.78 TPM:2.98
ORF EntryO_BomoMG10995_internal:A_BomoMG_comp38524_c4_seq1
Sequence
(Nucleotide)
AAGAAATTGAAATTAGACGAGGCACTTGAACAAGGTATAATTGACTCTGATACTTATGAA
ACATATGAAGATTCTTCTAAGTCGTACGATGTCAGAGATGTATATGTTATTGATCCTAAA
ACAAACGAGAAGTTACTATTAGAAGACGCTTTAAAACAGGGTGTCATTGACTCTGAGAGT
TACGAGAAGCTTAAAGATAATACAGATCACCAACAAGTATCACATGAAACTAAAGTTATT
AAAACCATTCTCATTAAAGATCCACAAACAGGTGAAAATATGTCTTTGGAGGAATCTTTA
AATAGAGGTGTTATAGATAAAGACACATATATAAAATATAACGAAGTATTAAAATCTAAC
AATCCTGAAGATTTGATGCTTCTGCAACGTCTTAAGGATTTTGATATAACAGTCACCGAA
CAGATTGTACAACACCAAGTAATAACTAAAACTACAACCAAGGCTGGAGAAATAATAACA
AGTAAAAAAATTGAATATGAACCGACCATTTCTATAGAACAAAAAGTCTCCGAGTTCGAA
GGTCCAATTCAGACAGTTGTTAAGGACGGTAAGACCGTATCTGCCATGTTGATTGATGCC
GAACGACAACCCTTAAGGGTAATTGATGAAATAACTGAACAAAATGTAACGAAAGAGAAA
CCGACTCCTGTTAAACCATTATATGAAAACGTAACGCTCATCGATGCTATTGCTCAAGGT
AAAGTGGAGCCTAAAATTTGTAGGATTATCATAAACGGAGTTGAATCTCCACTTACTGTT
CAAGACTCTCTTGAACAGGAACAGATAAGCCGATTTGTACAGGTTGATGTACTGTCTAAA
AATTGTGTAGTGTTGAAAGAGACCAAACCCACTTACTGTGTCGCTATATCTCAAAGATTA
ACCCCAGAAGAATTATCAGAAATGGGCGTATATGATATTGAGAAAGGTATTTTCTTAAAT
CCTGAAACAGGGGCTAAGATATCCTTTGAAGAGTTGGTTTATAGCTTACAAATATTCGAT
CCCGAGGCTATATTAGTTAAAGATTTAAGTTCTAAATCGGACGATTACATTTCATTTGAT
GAAGCTATCGCTAGACCTATAATTGATAAAACCACAGGTCACATGGTCAATCCGAAAACC
GGTAAACGCGTGCCCTTCTTAGAATGCGTTCAATTGCGATGGATTGTAGAGAAACCTGAT
GATGTTTCAATAACGGAACAGGTCACAATTGAATCCGCGCTAGAACAAGGATTATATAAT
GCTCAGACAGGTGTAATAAAAGATGTTAATACTGGTGCCTTAGTGCCTATAGGTGAAGCG
GTGCAAAAAGGCTTGATAGATCATGAGTCTTTGTTAATCACCGTACCGCGAACTAATGAA
TTAGTAACTCTCTCAGACGCAATAGAGCGTGGTATACTCGAAATTCACGACGGGGTTATC
ACTATTATTGAGACGCAAGAAATCATTGAAATATCTGTTGCTATCCAACGCGGTTTGATT
ACTATCATCCGACGGGCTGTTTCTATTGAAGCAATTATAAAGAGCCAAATGTATGATTCC
AAAACGGGAAAAGTTAAGGATATTTTGACTGATCAATTAATTACTGTACGCGACGCGGTA
GATAGGAACATAGTTCATCCAACAATATCTGAAGTAAAAGATACGGGAACCGATAAATTC
CTACCATTAGGAGATGCTCTTGATGTAAAACTCGTTGATCCAATAACAGGGAAATTAAAA
GACAAAAAGACTGGTAAATACATTCCATTAGACGATGCATTAAATAAAGGATTGGTTGCT
ACTAAATCTGTTACTTTCACTTTGTTCGATATCATCGAATTAGGTTACTATACACCTGAA
AATGGACAAATTCTAAATCCGATATCGGGTAAAATTATAACACTGAAGAAAGCTATTCAC
GAGAAACTTGTAGATCCTACCGAGATACAAATTAAAGATGATAAGTCAGAGGCAGTTGTA
TCGTTCGATAAAGCTGTACAGTCTGGCCTGATAGATCTTGAACAAGGAATAATCACGTCA
CCAGTTATGAACCTTAAAGATGCGTGTGATAAGGGTTATCTTCTTAGCGATAAAAAACCA
TGGACATTACAAGAAGGTCTCGTACAAGGATTTTACGATCCTGGAACGGGTCTTTTGACA
ATTAATAATATTACAATGACTTTAGAAGACGCTATCAAAATTGGTAATATAAATCCAGAA
GCTTTGACTGTAAGAAATGCAATAACGGGGGAAATTATTTCATTGTCAGACGCTATCAAA
GTAGGAATAATTGACTCTAAAGAAGGTAGGGTTAGAGATCCGGTTCACGGGGATAAAATA
TCCCTTACAGATGCCGCCGAACGTGGTTTAATTGTACCCGCCAAACGAAAATTAAGTTTG
CCAGAAGCAGTATTTAAGGGTTTCTACGATCCAAAAACTGGTAAATTTTCACATCCTCAA
AGTAAAGAGAAAGTGCCCACTGATAGGGCAATAAGGAAACGAATGATAGATCCTCAGTCA
ACTTTGGTACACTTTGCTGGTAAAGTAATTCCGTTTGAATTCGCAGTAGACAGAGGTATT
GTAGATAGCAGAACAGGTACTATATTTGTAGGCGATGAAAAAATTGACTTCCGTGAAGCT
TTTGAAAGGGGGGTTTTAGTTGAAGTTCGTAAACCTTTATCGCTCGTTGAAGCTATTGAA
AAGGGTGTTTATAATGAAATATCTGGACTGTTTATGGATCCACAAACTGGTAAAAAGTAC
ACTCTTACTGAAGCAATTAAACTTCATTTGATCGATCCTCATTCAGTGCACATTCAAGAC
AATAGATTAGGTAAATGGGACAAGTTGTCATTGCCAGAGTCCTTAGAAACAGGAGTCATA
GATGATCAAAGTGGTAAGATCAGAAATATAAATAATGACAATGAAGAAATTTCTTTACGC
AAAGCATTTGAAATCGGTCTCCTTGTTGATAGTAAAGCACCAATAAGCTTGCAAAGAGCA
TTGCATCAAGGACTTTACGATGATGCGACCGGTAAATTTATTGATCCAACTAGTAATCGT
AAAATTACTCTTCATGAAGCTATTAGGAGGTCAGTCATTAGTCCGAAGTATCTATGCTAC
TTCGACAAAAAATCTGAAAAACCTTTGTCTCTTGGCGAGTGTTGCCGTAACGAAATTATT
GATAGGAGAAGTGGCAAGTTCCACGAACCAGGTTCCGATGTCCAGATACCCTTATCTGAA
GCCATGAGTCTAGGATTAATCGTGGATATTGAAAGTGCTGGCTTCACTTTGTACGACACA
TTAGCCATGAACATGTATAACATAACAGAATTAATATTTATTCATCCGGTAACGGAACGT
AAAATAACACTTAATTTAGCAATAGCTGAAGAGCTCATAAATCCTGAAACTTCCTTG
(3417 bp)

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