SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38389_c1_seq1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_general_transcription_factor_IIF_subunit_1_isoform_X1_[Bombyx_mori]
Ontology
GO:0001096 F TFIIF-class transcription factor complex binding
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0005634 C nucleus
GO:0005674 C transcription factor TFIIF complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0016740 F transferase activity
GO:0022008 P neurogenesis
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0060261 P positive regulation of transcription initiation from RNA polymerase II promoter
Transcript
Level		FPKM:11.29 TPM:8.92
ORF EntryO_BomoMG10753_3prime_partial:A_BomoMG_comp38389_c1_seq1
Sequence
(Nucleotide)
GATTAGCATTGTTTTAATTGATTACAATATTTTTAATCAAAGAGTAAACTGTAACGTAAT
AAATTATTTGATTTGAAGAAATTTAACGTGTACGTTAGTGAGATCATGATATCGAGGACT
ATTGTCATTTGATAAATTTATATACCGTCATTAATCTTGATATTATAGATATAAGTGTAA
AAAATGTCTACACCTGGAAGTAGTACGACACCGGCCGCCACAGTACAGGAGTATAAAATA
AGAGTGCCAAAGAATGTAAAGAAGAAGTATCATGTTATGAGGTTCAATGCCACATTGAAT
GTAGATTTTGCAAAATGGACTCATGTCAAGATGGAGCGAGAGAACAACAGCAAAGAATTC
AAAGGAGCTGAAGAGGAAATGCCCAAATTTGGTGCAGGCTCGGAATACGGACGGGACATG
CGTGAGGAAGCACGTCGCAAGAAATTCGGTATAATATCAAGAAAGTACAAACCGGAAGAC
CAGCCGTGGATCCTGAAAGTCGGTGGAAAGACCGGCAAGAAATTCAAAGGTATTCGTGAA
GGTGGAGTATCAGAGAATGCTGCATATTATGTGTTCACTCACGCAGCGGATGGCGCAATA
GACGCCTATCCACTCCAGGAATGGTACAATTTCCAACCGATTCAGAGATACAAAGCGCTG
TCAGCTGAAGAAGCCGAACAGGAATTTGGCAGGCGTAACAAGGTTATGAATTTCTTCTCG
TTGATGTTACGGAAACGGCTCCGCGGAGTCGACGATGCAGACGAAGAGGACCCAGACGAA
AAGAAAGCTAAAGGGAAAGCTAAAAAAGACCTCAAGATATCCGAGATGGACGAATGGATA
GACTCCGACGACGCTTCCTCGGACTCCGGTGCTGGTGAAAAAGAAAAGGAAGAGGACAGT
GAC
(903 bp)

- SilkBase 1999-2023 -