SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38301_c0_seq2
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_UHRF1-like_isoform_X2_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005720 C heterochromatin
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007049 P cell cycle
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010216 P maintenance of DNA methylation
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030154 P cell differentiation
GO:0042393 F histone binding
GO:0046872 F metal ion binding
GO:0051726 P regulation of cell cycle
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
GO:0071158 P regulation of cell cycle
GO:0090308 P regulation of DNA methylation-dependent heterochromatin assembly
Transcript
Level		FPKM:0.40 TPM:0.32
ORF EntryO_BomoMG10610_complete:A_BomoMG_comp38301_c0_seq2
Sequence
(Nucleotide)
CACGACTGTTCGGCGGTTCTCTTGTTCCCGGATAGATCACGACTGTTCGGCGGTTCTCTT
GTTCCCGGATAGATCACGACCTCCGCTTCCCGTGTACGTGAACTCATTGCCATTGTCAAC
GTCATCTTCATATCCACCGGATAAAACAATGCTATAAGCGCCTTCTACGTCACGTCCGTG
GATTCCTGACACGGGCGGCCGATGCACGCCAGACTCGGATAACTGAATCCTGAACCGCCA
ACACATACCAACTTCGATGCCAGGGATCGGTCCAAAATGGTTGGCAGGCATAGCGCATGT
TTTCGTCTTACCAACACATGCCATTCCTCTGCCCCAATCGCGTTTACTCTGTGAAGCATT
TTTTTTCTTGGTTTGTTTGGCTGCTCCTGGCGCTACTACATCCTGAGGATCTCTTTTACA
AGAAGGGCAATACCAGTCCTCGTCGGGAAGATCTTTTAATGGAGGTTTGAGACAGCTCAT
GTGATAGCCGTAGTTGCACTCGTCACAGAGCACTATCTTTTCAGGAAACTCTTTTCCTAG
GCAGACATAGCAACCGCAGTCTTTACATAGTGCTTCTTCATCATCACGACAAGTCAAACA
AGTTAATGGTTGAGACCGTTTTTCAGGATTCATAGTCATTAATCTATTGTATTCATCACT
GCGCTTTTCCAGTGGTACAACTTCTTCTATGGCAAAAATTTTGTCCTGCAATCTTATTTT
GGTGTCATTCTGAGGTACTGCTTCGGGACCCAAATATAAAGTTCCCACTAAATCATAGCT
GGTGCGTAGTTTCCTTATTTCACTTACTTTGAAATCGAACCAATAACCTTTTTCCATTGG
CTCCTCAATATTGTAATTCACCATCACTGTTTGTCCAACTTTCAAATCCTTAATGTCAAT
AATGGTTCGTGCTCGTGGCCTTATGTCTTTTTCTTTGCAGTAAGATTCTGAGTCGTCTTC
GTCATTATCAAGTTGCACTTTATAAAGAAGGTTATCAACTATTCTGGTCTCACTCTTAGA
ATCTTTGTCTTTTTTCTTTCCTTTAGGACTTTTTGTGAAGTATTTAGCTATACCTTTACT
CTTTGGTTTACAATCACCATTCATTTCTATGGGTGGTTTGTTCTCTAAGTCATTGCAGTC
ATAATTTTGACTTTGATAAGAACTAGAAGTGTCAGATCCCTTCTCTTTTTCATGTTCCGA
TTTCTTTCCCTTCTGATCATGGACTATTCTAATTATTTTACTCTCGAACCAAGCGCCGTG
TTCTGGGTCCCTTACGTCGACCAAGTCTCCAACAGCATAGAGCTTGCTGACTGCATCTGT
ATACACAGCATCAGAAGATTCTTGTTCATGATTTTTGTTATTATCACTGTCAGTTTTGTC
ATCAGCTGTAGACTTCGTGAGGCTCTTTTTTGGACTATCTGTGTTTATTTTGACCATAAG
TTGGATGACATCATTTAATTTTATATTGTAATCATGAAATGTGTAGCCATTTTCAAGCAA
CTTTCCTCCATAAAACAACCGCTGTAATTTTGGTTGGACGTCGAATTTATCTCGTAGAAT
TTTTCTAAAATGGTCTATTTTTGTTAGTTTCGATTCCACTACAACTATTGTATCAGGTTT
CCCAAGCATCCTGATACGAACATGCATTTTCGTAAAAAATTACTACTTTATTTGCCTTTA
AATGGAATATCTTTAATTTACTAAATAAATATGATTCTAAATTTGAAGCGTACCTAACCG
(1740 bp)

- SilkBase 1999-2023 -