SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38297_c0_seq5
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		PREDICTED:_TIA1_cytotoxic_granule-associated_RNA_binding_protein_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006915 P apoptotic process
GO:0006952 P defense response
GO:0007281 P germ cell development
GO:0008284 P positive regulation of cell population proliferation
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0010494 C cytoplasmic stress granule
GO:0017091 F mRNA 3'-UTR AU-rich region binding
GO:0017145 P stem cell division
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:1.39 TPM:1.10
ORF EntryO_BomoMG10603_complete:A_BomoMG_comp38297_c0_seq5
Sequence
(Nucleotide)
AAAATATGTAACTTAAATTATTTATTTCTCCTTTTACAAAATGACCTTTTAGAATAAAAG
AATTTACAATTTTTCTCCATTCGATCGCCACTATCTACGTGGATTTAAATCACAAAGGAC
CCGGATCGCTCTTTATCTATAAAATTTGGACCCAAAACATAATACAGTTTCATATTATAA
TTATTATTATTATTATAGTCTATACGACAAATCAAACATCCATTCCCAGACCCACTTCTT
TATTGACATATCAGTTTGCCATTACAATAAATCATAACAATTCAGGTCAAACAAAACAAC
TTACGGTGAACTTAATATAAATATGTGTATCGGTCTGGTGAGCAGAGTCCAGGGTTGCGG
CGCGTCCGCCGGCCGCAATAAATATCAACCTTATGTACAGGAGTCCACACACGCGACAGA
TCCCCTCATAATAACCTCTTTAAAAAATTATAATTTATTTCGTTATGTCCTATCTATGAA
GGTCTCGCCGCCGCAGCCGGCGCCCTCTCGCGGAGGCGCGGCGTCGCTCGCAGAGACTGC
GTTTCACAAATCGACTTCTAGCGGTGTCTAACTCACGGATATTCGTTTACAGTCCCCTTG
CGAAACAGACTGGCTCGCTGACGTCATCGAATACAAATTCCACTGCAATATCAGTTCAGA
TAGAAGAAATTAACTGACTAGCTTTATAGAAAATATCATCTTTCATTATACATTAGATAC
ATTAGTAAGACAGTCTTAGAGGTATTGCTGTATGTTCTCATAACGTTCGGTGTGACGTCA
CGGCGGCGCCGCGCGTCGTCATAGTCTGTCCCTCTGTGACCGACAGAGGGGTGGCTCGGT
GTGCGGGGCGACGAGGGGCGGTGGTGCGGGGGGCGGGGGAGTGCGGCCTTGCTACTGGGA
GGGGTACTGCGCGGAGGGCATGGCGGCCGACGCGTACATGAGGGGTTGCGAGGGGCCGCC
CCACCCGGCGCCGCCGCCGCCATTACCGCCCATTCCCATGCGGTACCCCGCTGCCGCGGC
GGCCTGAGGGTTGCTGTACGCGGCCGCGTACTGCTGGTAGTACCCGGGAGCCATGTAGCC
CTGAGCATACCAATAGCCCATTCCTTGCTGATACGGGTAAGGATATTGGGACTGGCCGCC
CATCGCTGGAGGCGCCGCCGACGAGTTGTTCCCGCTCTGATCTGGGACCGTGCTGTTCGA
GTCTGCCGTGTGTCGAACCTGGTTTTCAGCACCTCCATTCTCTTTCCCCCAGAAACATTT
GACTGTGTGACCGCTTATTTCTGTATTGTGTGTAGCTTCTATGGCATGTGCTGCAGCTTC
CTTTGTAGTAAACCTAATGAATGCATAGCCCTTATCTCTGAAAACTCTGATGTCCTGTAT
CTGACCAAATTGTGAGAATGTGTTCTGCATTAACTCTTCAGTAATAATGTTGCTTGTGAA
ACCGCCACAGTAAACTGTGGTGTTTGTCGGTGAGCTTTGATTATAAACTTCGTCAAATGT
TGGCTGTTTTGCTCTCTTACTACTGGGCGCGCCTTCATTCACACCCTTCGCTGGTGGTTT
ACGCGTTGACCAGTTCGTACGTATGGATCTTGATCCCAGCCACTGGCCATTCATTGCCTG
GATGGCAGCTTCGGCATCTGCTTTCTTTACAAATGATACAAAAGCATAACCCTTGGATTT
GAGCGTTTGAGGATCGCGTACTATGCGACAGTTCGATATCTCACCAAATGGAGCGAAGGC
CTCTCGGAGTATGTTTGTTTCGATTTCTGGAGACAGATCGCCCACGAATATGTGATGATG
ATTACTAGTGTCCGTCTTCGGCTGGTTACCAGGACTCGTCGCCCAATTAACCTTCATTTC
CTTGTCGAGGACCACTCGCTTGTTCATGGCGGCCAGCGCTGTGGCCGCCGCCGTGTGACA
CGTAAACTCGAGAAATGCATACGGGTCATTTCCTGGCTCCCGTATAATCTTGCAACCTTT
TACATCGCCTATTTGACCAAACAACGTACATAGGAAAACTTCTGTGACACTCGGGTCCAA
ATTACCGACGTAGAGAGTTTTCGGGTGGCTTTCGTCGCCCATATTAGCTTATCGTAATCT
GTCGATTACTTTTTTAACGTCTATGAACACTAATATCAATATTAATCGCTTAACAACGTG
TTATTTCATCACTTATAACATTGGATAACGAATAAATGAAAGAAAAATGTCGCAAACAGC
GCTTAGAACTTCTCGAAAAACGATGCTGTTGACTCGTGAAACGTTCACTTTTCG
(2274 bp)

- SilkBase 1999-2023 -