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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38277_c0_seq1
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		PREDICTED:_spectrin_beta_chain,_non-erythrocytic_5_[Bombyx_mori]
Ontology
GO:0000165 P MAPK cascade
GO:0003779 F actin binding
GO:0005088 F guanyl-nucleotide exchange factor activity
GO:0005200 F structural constituent of cytoskeleton
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0007411 P axon guidance
GO:0008091 C spectrin
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0019905 F syntaxin binding
GO:0031532 P actin cytoskeleton reorganization
GO:0032403 F protein-containing complex binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0043234 C protein-containing complex
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0051693 P actin filament capping
GO:0070062 C extracellular exosome
GO:1903561 C extracellular vesicle
Transcript
Level		FPKM:19.48 TPM:15.39
ORF EntryO_BomoMG10565_internal:A_BomoMG_comp38277_c0_seq1
Sequence
(Nucleotide)
GCGGGCCGGCCGCCCAGCGCCGCGCGCTTGTCCGCCGCGCGCGACACCAGCTCGCCCACG
TCGCGGTGGAAGCGGTGGATCTCGCCCGCCGCGTGGAGACGAGACCCTCGCGACTGGATC
TGCTCCACCAGTCGCTGCCACGACTCTCCCAGCGCCTCCTGTCTCTTCTCGATGTCCTCG
ATGTAAGGGCTCTCGGACGCCAGCAGCTTTTTGGCCAGCTCCTCGCACTGGTTGAACCGT
TCCGCTCCACTCTCGACGCGGTGACGGAGCTCATCGAATTTAGACCGTAAGATCAGTAAG
TGTTCGTAATCCTGGCCGTAGTCCTCGCTGGAGGCTGCGGCGTACTGCTCCTGGATCCAG
TGCTCCAACTCCTCGCTCTCAGCCAAGTATTCGTGCCTGCAGACGCTCTCGACCAGCGCG
TGCTGCCGGTGCGCCGCCAGACGCTGCAGCCTCGCCAGGGTGTCGGCCAGCGCGGCGTGG
CGCGACACCAGCGTGCCGCCCTCCGGGTGTCCCGAGCCCAGCATCGACGACGCCACGTGG
CCCATCTCAGAGATGATCGCGGCGTACGTGTCCAGTTCCAACTCTACAGCCTTATGCCTC
GTCAAGAGTTGAGTGGCCCGATGTCTGTCTCCTCCAACGTCGTCGGTGGAGAGAGCTGTC
GCCTTGTCAGCGAGCCAGGAGTCCACCTCGCGGGCCTCGTGCAAGAACTGCTGCGCCCTC
AGCGCGGCCTCCAGACGCGAGGCCCTGGCGTCCGCCGCCGCCGACACCTCGGTATACGCT
GACTCCAACTCTTCGCAAAGAGCCAGGATCTTATCTTTCTGCGGGTGTCCCTCTGCGACC
AGCCCGCGGCCCTGCTCGATGACGCGCGCGATGAGGGGCCGCCGGCCGGTGAGCTCGGCG
CGCAGCTTCCCGTGCTTCTTCTGCGCCGTCTGGGTGGCGTGCAGGTCCGCGGGCAGCGCC
TCCGACGACGCCGCCGCCTTGCGCTCCGACAGCCAGTCCAACTCGCCGGCTACCTCGGCA
GCGAACTTGTGGTGCAGGAGACTTCGGTTCAGCGCCTTCCTCCTGGCCTCGGCGGGCGGC
TGGAGCGCCGTCACGGCCCGCAGTAAGGCAGCGCTGTCCCTCTCTATGGCCGGCCCGTCG
AAGTGCCCCGCCGACACTAAGTCGGCACCTTGAGCAGCCAACACCGTCGCCTTTTGCTCC
CACTGACTTAATTCTTGCTCCAGAGTCTGGTGCTGGTTGAGCAGTCGCTTGCAACTCCTC
AAGTCGGTGCCGATCTCTTCGCTTTTCAACGCCCTCTCCAACTCCACCAGTCTCGCCTTC
GCGTCTTCAATAGACCTGCGGTGTTGCCTCTGTTGAGCTGCTTGGCGGAGCTTGCCCCCC
TTGTCCCTGGAGGCGGCCACCAGCGCCTCCCAGGCCTCGCGCAGGGACTCCAGCCGCGCG
CTGACCTCCTGGGCGCGTGCTGGATCCGACTTCTGCAGAGACTGTCCGATACTCTCAACA
TTCCTGAGTTGCTTCTCGTTGGCTTGTAACTCCCTTTCAAATGCTTCGTGTTTCTGAAGT
TTACGCTCCAAATTGGCCAAATCTCTGTAGCTCTGGTCCTTGGCAGTCTTCGTTTTGTCC
TGGATCCAAGTTTGCAATTCTTCAACTGCCGCCACGAACTGCTGGTACGCCAGGCTGGCG
TGCAGCGCGCGGCGTCGCTCGGTGGCGGCCAGGCGCACAGCGTCACGACGGGATAGCACG
GCGTCGCGACGGGACACGATGTGCTGCGCAGCATAGTGTGGCAGTTCCAGCAGCGCGTCA
GCCCGCTGCACGAAGGCGGACAGCCTCTCGTCCTGCGCCGCCAGCCGCGCCTCCAGCTCC
TCGTGCCTCTTCACCAGGGCCTCGGCCTCATCCACCGACGACCCGAAGTGCGTGTAGTCC
AAGTAAGCCTCGTGGGCCCCGGACGACGCGTCGATCTGGTCGGCCTCCCGGTTGAAGCAC
TGCAACTGCACCAGCTGCTTCAGATATGCGTCCTTGTCTTGCCACTCTTTGGCGACCGCC
TTCTGGTCCTGCTCCAACTGCTTGATCTTGTCCGCCACGTCCGTGAGCGCAGGGTTCTTG
GACAGCAGCTGTTTGCCGAGAGCGATCACCTCCTTGAATTCGTCGTCATGAGTCTTGATG
TCGTCCAGCAGCTCCTTGTGTTGGTCGTGCAGAGCCTCGGCCGTCGCGACGTCCTTGGCG
GTGGCCTCTTGCGCTAGCTGCTCTCTCGTTTTCTGCAGCCAGCCTTGTAGCTGGGCGCTA
CTGTTCCCGAATATCTGGTGCCCCACGGCGCTCTCCAGCCTGTCCCTCCTCTCATCAGCC
TGCTGCCGACACCTCTCCCAGACGCGCTGAAGCTCTCTCTGTCTCGCTTCCACATTAGCC
CTCTCGCTCGGATATTGGGACTTCACTGAGTCGGCTAGCAGACTGACGGTGGCGACCTTG
TCCCGGAGCGGCTGCAGGTCTCGCTCGAGCTGGGCGTGTCTCCGCTGCAGCGCGCGCACG
GTGCGCAGGTCGCTGGCGGCGCCCGGCCCGGCCGCCAGCTGCTGCTCCTTCTCCGCCATC
CACTCCAGAGCCTCGTCGCAGGTGCGGCTGAACAACTCCACGCTCGACGCGCCCTCCAGG
CTCTTCTCCTTCTGTTGTTTCAGTCGCAGTAGTTTATCCCACTGCTGGCGCAGCTGCTGC
TTCCTGGCGACCGCCTTGCTGGCCTGCCCGTGCCTGGCGGAGACCAGCTCCTCGGCAGCC
TCGTCGATGTGCTCCAAGCGCTTGGAGGCCGCCGACAGATCGGTCACGAATTTCTCATAC
TTCCTCTTGGCGGTGTCCACGCTCTCCTCGCCGTCGTCAGACTTGAGGAACTTCTCCTTG
TCTTTCATCCACTTGTCAAAGTCATCGCACTCGGCGAAGAAGCTGTACAGCTTTATGGCA
TCCTCGAGTTGTTCACGACGCGCAGACGACAACGCTACCAACTCGTCGTAGTCCTTCTGT
ATGTCCGCCATCCTGGCTGCCACGGTGACGACCTTCTGCTGGACCCTGGACGCCCTCCTG
GCGGTCGGCTTGTTCCTCTTCACGGGCACCACCTGCTTCACCAGCACCGTTTTCTTCACG
CGCTGAACCGTCCTCACCTTCTCTGGTCTGCGGACTTGGACCGGCACGACCCTGGGCTCG
ATCTCCCGCACGTAGTTGGCGGGCACGAAGCCGTCGGTCCTGTCCGCCTTCCGCACCGAC
CACCAGTCCGGGTTCGTCTTGTTGATCAGGAACATGACCTCGCCCTTCTGCATCGATATC
CCTTGGCCCGTGAATGGGTACAGCGCTTTCACCTGCGGTACTTGTCTCTCCTCGGTGACG
GTCCTGTGCTCGAGTCTCTCGACCGGCTCCTCCTCCCACACCTCGGTCGGCACCAGCCTG
GACTCGTTCACCCACTCCTCGTCTTCCATGCCCTGAGTGGACTCCACTTCCGTTGGTAAC
TGGAGGCACTGTATGCCGGCCTGCTGCAGGCGGGCTGCGTGCGCGGCGAGGGTCTGCAGC
TCGGCGTGGTGCGCGCGGATGGCGTCGTGCAGCGCGCGGTGGCG
(3584 bp)

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