SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38276_c0_seq2
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		splicing_factor_45_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000380 P alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
Transcript
Level		FPKM:7.60 TPM:6.00
ORF EntryO_BomoMG10564_complete:A_BomoMG_comp38276_c0_seq2
Sequence
(Nucleotide)
ATAGGTAGTACATAAATATTATTAAGCAATTTAATATTTTAAAGAAACCAAAATCATGCG
CAACACTAGATAAAAGTTGAGGTTTTAAATAGAAATATAGAAAACTAGTAAAAATAACAT
TGTGAAGGAAACAAATCATTAGTTTTAACCAGCAAAGTGGTCTCATCATTCTCGACATTT
ATGTGGTTACTTGGCTTTGGTGCTTGTATGGAACACATAATTGACTTTAATTCGTTAATG
TTAATGATAACGCATTTTGTGAAACGCAGCAATCCAGTCATCAAAGATGTCTCTTTATGA
CGACTTAGATACGATAAAAACACGGACCACAGAAAAAGTAGCGGCATGGTCTTCAGGAAT
TAAGTTACTACAGTCACAGTTACAACTAAAAAAAGCAGCAGTTACACAACCTAAACGAGA
AGCCTTGCGTCGTTCCACACAGGTGCTAACGCCAGTCATCGATTTAAAGAGCAAATCAAA
AGATGAAGAAGAATCAAACTCTAGTAGTCCCAAGATTCAGCCTAAAACAATAACTGCTTC
ACTAAATGTCCGTGATTTTGATTGGAATGTGGCCAATGAATATGACCCAATGTGGCCTAA
TGATTATGAAAAAGTTGCAAAAGAATTGCAAGCAAAGAGGCTTCAGTCAGATGACAGAGG
AGACAGGTTGGATAGGAAACGAAAGAGCAGGTTTGGTGATGATGAAGACATAATTCCAGA
GAAAACTCTAGTTGCAATGCAACCTGAAGAGGAGGAAGCTGAGGAGATATCAAAGAGAGC
TACTGGAGTTGCTATAGCTCCTCCACCTTCTCTGACTACAGAATCTTCATCACCACCCCC
AATTAGTGCTCTACCGCAAGCAACCGCATCAGCTGGGTTCTCCATCGGTGGTTATGGCGC
TAGTTCAGTAGCTGCAAAGATAATGGCAAAATATGGATTTAAGGAGGGTCAAGGGTTGGG
TAAAAAAGAACAAGGAATGTCGGTGGCCTTGCAAGTCGAGAAGACTTCAAAACGCGGTGG
TCGAATTATTCATGAGAAAGACAATAACGTGATGCCACCACCAGGCTTTACAATGCAAGC
GCCCGCTGGACCAGATTCGCCAAATACATCATCTAATTCACCGCTTCTGTCAAGAAACGA
GCCATCAATAACTGAAATAATGAAGACACCAAGCAAAGTTGTATTGCTTAGAAATATGGT
TGGTCCAGGCGATGTTGACGAAGAACTAGAGCCCGAAGTCAAAGATGAATGCAACACAAA
ATATGGAGAAGTAGTCAAAGTGCTCATTTTTGAAATGCCGAATGTACCGTCAGATGAAGC
AGTTAGAATATTTGTTGAATTCAAACGAATTGAAAGTGCTATTAAAGCAGTAGTTGATCT
TAATGGACGTTTCTTCGGTGGGAGACAAGTTAAAGCTGGTTTCTATGACGTAGAAAAGTT
TAATTCACTACAATTGATAGAATGAAATAAATAATATGT
(1479 bp)

- SilkBase 1999-2023 -