SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38258_c0_seq1
Scaffold_idBomo_Chr2
NCBI non-redundant
(nr)		PREDICTED:_methionine--tRNA_ligase,_cytoplasmic_isoform_X3_[Bombyx_mori]
Ontology
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004825 F methionine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006431 P methionyl-tRNA aminoacylation
GO:0016020 C membrane
GO:0016874 F ligase activity
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:11.56 TPM:9.13
ORF EntryO_BomoMG10536_5prime_partial:A_BomoMG_comp38258_c0_seq1
Sequence
(Nucleotide)
TTTTTTTGTTACTGAATAAATAATTTATTTCTTGACTTGCAGTGCTTGGAGACGTTTTTT
CAGATCGAGCAATACATTTACTTCAGGCTGCCACACGGCCTTGTCTTTTGTTGAGGCTTT
CAATTTCCGGACTTTGTCACCCTGCTCAGCAATAGCTTTCTCTAAGCTGGCCACATCGCC
AGCGGCCTGGTTCGCTGCTGGTCGCGTTTCAGCTTGCTTCTGAGCTTCGGTGAGCCGTTT
CTTCAGCTCTAACAGCTTCTCAACCTCCGGTTGCCATACTGACTTATCTTTCGTTGTCGA
CTTCAATTTTCTAACTGCATCGCCCTGCTCAGCTATTGCCTTCTCTAATTCAGCTATATC
CAACGTTTTGGAGTTTTTCTTATCTGCCCTCTGGCTCTGCGTGCCGGCGTACCTCGCCCT
CAGCTCCTCGAGCCTCTCCTGCTCGATCTTCACGAATAAGGGCTCCGGTTTCCCGATGAT
GTGACCCGGCGGCAGGTACCGGAGGAGCCTGGGGTTCTCGGGGTTCAGTCGGAGCTTTTC
GGCGTCCACGTTGAGTTGTCCGCGGAGCTTGCGCGTCGTGTCCGGCACGTAGGGCGCCAG
CAGCGCGCACAGCAGCGCCACGAGCTGGCAACACAGACCGATGGCTGTTGCACCCCTTTG
CTTATCATCCTCGCTTCCTTTGAGCAGCACCCAGGGTTGCTCCGACTGCATGTGCTGGTT
GCCGAGCCTAGAGATGGACAGCACGTGCCTCAAGGCCTCACGCAGACGACCCTTCTCCAT
GTTCTGCACGTACGCTGCTATCTCCCTGTTGACGAGCGCCATCAGCTCGTAGTCCGAACG
TCGCGGGTTCGGTTCCGGGATGAGACCCTTGAACGCGTTCGAACAGAAGCTCAACGAACG
GTGACAAAAGTTTCCCAGGTTGTTCAAAAGCTCCGAGTTGTTCCTGGTGCCCAGTTCGGT
CCAGCTGAAGCTGGAGTCCGAGGTCTCGGGTCGGATGCTGGCCAGGTAGAAGCGCCACAC
GTCCGACGGTATCCCGGTGTCTTGCGCGTCGTTGCCAAACACACCGACGCCTCTCGACTT
AGAAAACTTCCCTTCTTCGTAGTTCAAGTATTCGGTGGCGAACAGGTGCTTGACCAGCAG
GTGGCCCTCATTGACGCCCAGGACGGTCGCCGGGAACATGACCACGTGGAAAGGCACGTT
GTCCTTCGCCATGAACTGATATAAACTGACGTCATATTCCTTGTCAGGTTTCCACCAGGC
CTCGTATTGCTTCGTGGCGCACTGGGTGATGCTCATGTAGCCGATGGGAGCGTCGAACCA
CACGTAGAAGACCTTGTGTCGGTACCCGTCGAGCGGCACGGGCACCCCCCAGCGCAGGTC
GCGGGTGAGGGCGCGCGCCCGCAGCGGCTCCCGCAGCCAGG
(1421 bp)

- SilkBase 1999-2023 -