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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38101_c0_seq5
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		putative_splicing_factor_pTSR1_[Danaus_plexippus]
Ontology
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
Transcript
Level		FPKM:3.51 TPM:2.77
ORF EntryO_BomoMG10261_3prime_partial:A_BomoMG_comp38101_c0_seq5
Sequence
(Nucleotide)
GAAAATTATGGGAATCGTAGACAGCGCCAGTGAAAAGAATAGTAGAAATTAGGTTGAAAT
CTTTGGATTTCACTACTGATCAGATTTATTCTATCAACTTCTGCTGTCTGATTATCTGTA
AAACATTCACAAAAGGCATTAGACTTGAAAATGTCAGCACACGAGCAAATGAGGGCTATG
CTAGATCAGCTTATGGGCACAGCTCGAAATGGTGAAAGTGACAGACATGGGGTAAAATTT
TACGATGATTCTGTATGCAAATCATTTTTGTTGCAATGTTGTCCACATGAAATACTGTCA
TCCACCAAAATGCCCAACACTAGTCTTTATCGCTCATCACAATACTTAACAGATGAGGGA
TAGATTGTATGAGTTAGGCTGTTCTGTAAGTACCCAGATGTACGTATAAAACATTTATAG
TTAGCTGAATGTAATCTTACTGCTAAGCAGGATTTAATTCAATATGGTTCTTGTCATTAA
ATTGTTTACTAATGCTGCATTGGTGAGTACATATAAAATTTTAGGACCTTCAAAAAACTT
AGCCTGGTGTGAAATATTTGGTGACATACAATAACTACATTGGGTATGTACTGTGCTGTT
TAAATGTGTAGGGGTACAAATACATTTGCATGTGCTAAAATGGAATAAAATTCTTAAAAA
AAATATATTCTAAAAACAATATACAATATGTAAGCATAAATAATAAACAAACAAAACTGA
AATAAAATTCAATTTGTTGTATGAAAAACATGATCTACATCTATATATAAAAATTGAAAA
TATTAAGTGGCAATCATAGCTATTGTTCTAGTCTACACACTTTCTGTAATTGTGCTTGAT
TGTCACATTCATTTTATTTTATGGCTTCACTTCACTCTTAAAACCAAAATAGTATTGTAA
GAAATTCTGGAGGGTGTTTCCACTATTTGTTGTAAGTATTTGAAAATTATTATTGAACGA
GGGAGTGAACCAGCTCAGTGTGCATTTGTCGGTGTTATAGTATGTATTTTATATTCTATA
TTTTACCTATGGAGATATTTTTACATATTTTCATAAAGATTGTTGAAACAGTATGATTTG
GGGTCTTTGAGTTTTGCAAGCATAAACATATGTGACACCATTCCTGACCCATACATTTTG
TCATAAAAATGAACTTTTACTTTTCATGTGGTTTTAATTTTTTCTTTTGCAGCGTATGGA
TTTAGGTGAGTGTCCCAAAATACATGATCTGGCTCTACGGGCGGACTATGAAATAGCTTC
CAAGACCAAAGATTATTTCTATGACATTGATGTGAGTATAAATAACTGCATTTTTTTTTG
TTAAAATTGAAATATAAGATATTTACACAATTTCAAATTTTGATTAATGTATCTTAAAAC
TTCCAGTCTCAAATGTTTTGTTTTGACATGAATTCGACCATGGATCAAAGCCGTAAGACT
TATAATTATTGTATTTAAATTGTGGTCAATTAAATAAAATTTTACTATTTTATGTAAAGG
CTACAGAGCACTTAGAGGCGTTTATAGCTGATTGTGATCGTCGAACTACTGCTGCTAAGC
AACGTCTGGCGGAGACACAAGAAGAACTGTCAGCAGAAGTGACGGAGAAAGCCAATGCTG
TTCATGAATTGGCAGAGCAAATAGGGCAGAAACTGGCTCGGGCTGAGGCACTCGGAGAAG
AGGGTATGGTCGAGGAGAGTGTCAAATTAATGGGAGAGATTGACGAACTCCGCAAAAAGA
AAGCTATCGCCGAGCAAGACTATCGTAATTCCATGCCCGCTTCGTCCTACCAACAGCAGA
AGTTACGAGTTTGCGAAGTTTGTTCAGCCTATCTTGGCATTCACGACAATGATAGACGTT
TGGCCGATCATTTTGGAGGAAAATTGCATCTCGGATTCATAACTATTCGTGAAAAATTAA
CAGAATTAAAGAAAACTGTGGACAAGCGACGCGAAGAGCGCGGCGCGTCGGAGCGCGAGC
GGAGCAGCGGGCGGCGGCACTACGTGGGCGGGAGGGAGCTCGACCGGCGCGCCCGCCGGC
A
(2041 bp)

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