SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38101_c0_seq3
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		putative_splicing_factor_pTSR1_[Danaus_plexippus]
Ontology
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
Transcript
Level		FPKM:0.03 TPM:0.02
ORF EntryO_BomoMG10259_3prime_partial:A_BomoMG_comp38101_c0_seq3
Sequence
(Nucleotide)
TTGATCTTGAAATCTTTACTGGATTTTGATATAATGATATTTTTCATAATTAAAATCTTA
ATGTATTATCTTCAAGTGGAAAATTTGCTTTCACAATTGTGACAGAGAAGTAGATAATTG
CTATACTCTTAACTGGATAGTTCTTTGTTTGAGGCGCTGTTCTGCTGTTAGACCCTGGTC
TTACCTTAGAGCCAGCACTGATTGTATTGTATTATATAAATAGATGAAACAACATTATAA
TGAGATCTTAGATTCAGGGGATTTGCAGTGCTCTATGCCTTTTCACATACACTAGGATAG
TAATTTTGAAAAATTTTGGATTTAATTTATATATAATTCTCCTATTGTATGTGTTCTACT
ATCATCTGTCACTTCTATTATACAATAAAATGTTGTATTGTCACTGGAATATACTCACGT
CAGAGTGGCATTAACTGTGGTGAAATATGCTTTTCAGAAAATGCCCAACACTAGTCTTTA
TCGCTCATCACAATACTTAACAGATGAGGGATAGATTGTATGAGTTAGGCTGTTCTGTAA
GTACCCAGATGTACGTATAAAACATTTATAGTTAGCTGAATGTAATCTTACTGCTAAGCA
GGATTTAATTCAATATGGTTCTTGTCATTAAATTGTTTACTAATGCTGCATTGGTGAGTA
CATATAAAATTTTAGGACCTTCAAAAAACTTAGCCTGGTGTGAAATATTTGGTGACATAC
AATAACTACATTGGGTATGTACTGTGCTGTTTAAATGTGTAGGGGTACAAATACATTTGC
ATGTGCTAAAATGGAATAAAATTCTTAAAAAAAATATATTCTAAAAACAATATACAATAT
GTAAGCATAAATAATAAACAAACAAAACTGAAATAAAATTCAATTTGTTGTATGAAAAAC
ATGATCTACATCTATATATAAAAATTGAAAATATTAAGTGGCAATCATAGCTATTGTTCT
AGTCTACACACTTTCTGTAATTGTGCTTGATTGTCACATTCATTTTATTTTATGGCTTCA
CTTCACTCTTAAAACCAAAATAGTATTGTAAGAAATTCTGGAGGGTGTTTCCACTATTTG
TTGTAAGTATTTGAAAATTATTATTGAACGAGGGAGTGAACCAGCTCAGTGTGCATTTGT
CGGTGTTATAGTATGTATTTTATATTCTATATTTTACCTATGGAGATATTTTTACATATT
TTCATAAAGATTGTTGAAACAGTATGATTTGGGGTCTTTGAGTTTTGCAAGCATAAACAT
ATGTGACACCATTCCTGACCCATACATTTTGTCATAAAAATGAACTTTTACTTTTCATGT
GGTTTTAATTTTTTCTTTTGCAGCGTATGGATTTAGGTGAGTGTCCCAAAATACATGATC
TGGCTCTACGGGCGGACTATGAAATAGCTTCCAAGACCAAAGATTATTTCTATGACATTG
ATGCTACAGAGCACTTAGAGGCGTTTATAGCTGATTGTGATCGTCGAACTACTGCTGCTA
AGCAACGTCTGGCGGAGACACAAGAAGAACTGTCAGCAGAAGTGACGGAGAAAGCCAATG
CTGTTCATGAATTGGCAGAGCAAATAGGGCAGAAACTGGCTCGGGCTGAGGCACTCGGAG
AAGAGGGTATGGTCGAGGAGAGTGTCAAATTAATGGGAGAGATTGACGAACTCCGCAAAA
AGAAAGCTATCGCCGAGCAAGACTATCGTAATTCCATGCCCGCTTCGTCCTACCAACAGC
AGAAGTTACGAGTTTGCGAAGTTTGTTCAGCCTATCTTGGCATTCACGACAATGATAGAC
GTTTGGCCGATCATTTTGGAGGAAAATTGCATCTCGGATTCATAACTATTCGTGAAAAAT
TAACAGAATTAAAGAAAACTGTGGACAAGCGACGCGAAGAGCGCGGCGCGTCGGAGCGCG
AGCGGAGCAGCGGGCGGCGGCACTACGTGGGCGGGAGGGAGCTCGACCGGCGCGCCCGCC
GGCA
(1984 bp)

- SilkBase 1999-2023 -