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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38101_c0_seq2
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		putative_splicing_factor_pTSR1_[Danaus_plexippus]
Ontology
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
Transcript
Level		FPKM:2.13 TPM:1.69
ORF EntryO_BomoMG10258_3prime_partial:A_BomoMG_comp38101_c0_seq2
Sequence
(Nucleotide)
TTGATCTTGAAATCTTTACTGGATTTTGATATAATGATATTTTTCATAATTAAAATCTTA
ATGTATTATCTTCAAGTGGAAAATTTGCTTTCACAATTGTGACAGAGAAGTAGATAATTG
CTATACTCTTAACTGGATAGTTCTTTGTTTGAGGCGCTGTTCTGCTGTTAGACCCTGGTC
TTACCTTAGAGCCAGCACTGATTGTATTGTATTATATAAATAGATGAAACAACATTATAA
TGAGATCTTAGATTCAGGGGATTTGCAGTGCTCTATGCCTTTTCACATACACTAGGATAG
TAATTTTGAAAAATTTTGGATTTAATTTATATATAATTCTCCTATTGTATGTGTTCTACT
ATCATCTGTCACTTCTATTATACAATAAAATGTTGTATTGTCACTGGAATATACTCACGT
CAGAGTGGCATTAACTGTGGTGAAATATGCTTTTCAGAAAATGCCCAACACTAGTCTTTA
TCGCTCATCACAATACTTAACAGATGAGGGATAGATTGTATGAGTTAGGCTGTTCTGTAA
GTACCCAGATGTACGTATAAAACATTTATAGTTAGCTGAATGTAATCTTACTGCTAAGCA
GGATTTAATTCAATATGGTTCTTGTCATTAAATTGTTTACTAATGCTGCATTGGTGAGTA
CATATAAAATTTTAGGACCTTCAAAAAACTTAGCCTGGTGTGAAATATTTGGTGACATAC
AATAACTACATTGGGTATGTACTGTGCTGTTTAAATGTGTAGGGGTACAAATACATTTGC
ATGTGCTAAAATGGAATAAAATTCTTAAAAAAAATATATTCTAAAAACAATATACAATAT
GTAAGCATAAATAATAAACAAACAAAACTGAAATAAAATTCAATTTGTTGTATGAAAAAC
ATGATCTACATCTATATATAAAAATTGAAAATATTAAGTGGCAATCATAGCTATTGTTCT
AGTCTACACACTTTCTGTAATTGTGCTTGATTGTCACATTCATTTTATTTTATGGCTTCA
CTTCACTCTTAAAACCAAAATAGTATTGTAAGAAATTCTGGAGGGTGTTTCCACTATTTG
TTGTAAGTATTTGAAAATTATTATTGAACGAGGGAGTGAACCAGCTCAGTGTGCATTTGT
CGGTGTTATAGTATGTATTTTATATTCTATATTTTACCTATGGAGATATTTTTACATATT
TTCATAAAGATTGTTGAAACAGTATGATTTGGGGTCTTTGAGTTTTGCAAGCATAAACAT
ATGTGACACCATTCCTGACCCATACATTTTGTCATAAAAATGAACTTTTACTTTTCATGT
GGTTTTAATTTTTTCTTTTGCAGCGTATGGATTTAGGTGAGTGTCCCAAAATACATGATC
TGGCTCTACGGGCGGACTATGAAATAGCTTCCAAGACCAAAGATTATTTCTATGACATTG
ATGTGAGTATAAATAACTGCATTTTTTTTTGTTAAAATTGAAATATAAGATATTTACACA
ATTTCAAATTTTGATTAATGTATCTTAAAACTTCCAGTCTCAAATGTTTTGTTTTGACAT
GAATTCGACCATGGATCAAAGCCGTAAGACTTATAATTATTGTATTTAAATTGTGGTCAA
TTAAATAAAATTTTACTATTTTATGTAAAGGCTACAGAGCACTTAGAGGCGTTTATAGCT
GATTGTGATCGTCGAACTACTGCTGCTAAGCAACGTCTGGCGGAGACACAAGAAGAACTG
TCAGCAGAAGTGACGGAGAAAGCCAATGCTGTTCATGAATTGGCAGAGCAAATAGGGCAG
AAACTGGCTCGGGCTGAGGCACTCGGAGAAGAGGGTATGGTCGAGGAGAGTGTCAAATTA
ATGGGAGAGATTGACGAACTCCGCAAAAAGAAAGCTATCGCCGAGCAAGACTATCGTAAT
TCCATGCCCGCTTCGTCCTACCAACAGCAGAAGTTACGAGTTTGCGAAGTTTGTTCAGCC
TATCTTGGCATTCACGACAATGATAGACGTTTGGCCGATCATTTTGGAGGAAAATTGCAT
CTCGGATTCATAACTATTCGTGAAAAATTAACAGAATTAAAGAAAACTGTGGACAAGCGA
CGCGAAGAGCGCGGCGCGTCGGAGCGCGAGCGGAGCAGCGGGCGGCGGCACTACGTGGGC
GGGAGGGAGCTCGACCGGCGCGCCCGCCGGCA
(2192 bp)

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