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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38030_c0_seq2
Scaffold_idBomo_Chr7
NCBI non-redundant
(nr)		PREDICTED:_cyclin-H_[Amyelois_transitella]
Ontology
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005675 C transcription factor TFIIH holo complex
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006294 P nucleotide-excision repair, preincision complex assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006361 P transcription initiation from RNA polymerase I promoter
GO:0006362 P transcription elongation from RNA polymerase I promoter
GO:0006363 P termination of RNA polymerase I transcription
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016538 F cyclin-dependent protein serine/threonine kinase regulator activity
GO:0019907 C cyclin-dependent protein kinase activating kinase holoenzyme complex
GO:0045737 P positive regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070985 C transcription factor TFIIK complex
GO:1901409 P positive regulation of phosphorylation of RNA polymerase II C-terminal domain
Transcript
Level		FPKM:2.75 TPM:2.18
ORF EntryO_BomoMG10140_complete:A_BomoMG_comp38030_c0_seq2
Sequence
(Nucleotide)
TAATGCGCCATTTAATTTAAAATTAATTTAATGTTCCTCGCATAGTTTTGAATTATAATA
GGCAAAAAAAAAAAAACTTATGAGCATGCATTTAATGTTGTTTTTTTATTATTAGAATAT
ATGTACAAAAATGTATTAGATAGAATTCTTCGTAGCATAAAATGGCGTGCAAAAGATAGG
TATGTAGGTTTAGTCTTTAAATTAATGTGATAAATGTTTGTTTTTTTTTTACCAAATAAT
TAATCGATTTTAATTTATAAGACGGCGAAAATACCGTAGTATATTAGTTTTACGATTAAG
TAGTGTTTTATAATTAATTATTGCAATGTTTTTCCAAAGAGAAATCGGTTGGTGCAGGAG
TACAGTTATTATTTGAAAAAATCCACGACTCAGTCGTTTGGTTTTTAGTTGACTGCGTTC
TATATGAATAAAGTAGGAGTGCTGTGGTCCGCGGTCCTAATGCATCCACCACTCGATAAT
TTTTCGGGACTTTGAGTTCCGCGAAGTACAATGTAGCTGTTTTGACACTGTCATCGTTTT
CGCGGTTTTTTATTGTGCCACAGATTATATCGTTACGGGTCCGTAGGATCTACACGTGTG
TAACCTTTTTGGTAGTATTTGTCACGTAATATAGTTTGAATAAAAAAAATATATATATTA
TATTTATTTTCGTTATCATTTTATGAGAACGTTGCAATTTTTTTGTAGCATATCGCAGAC
ATGGACCAGTTTGTCAAATAATTCAGAAGCCATATGTACGTCACTAATAGATAATTTAAT
TTTGTTGCAGACATTAAAAGGTAACAATATTAATAAGGGTTGTGTTAAAATATTTTTTTC
TTCATAAAAGTGGCACACCGTAATCGTGATATTTATCGTCTTAAAGGTCGACTGTCCATC
GGATTGTTTAAAGATAAAGAGACGCATTACATAATCGATCTATATTGGATCATAGCGCAA
ATATGAACCGTTAAATAAATATAATCCAATAATACTTATTACAGGATCATAATGAAATTC
ATTGTGATAGAATCGCAATTAATATATGGCTTCGTATGAGCCGACGTCACTTGTGGTGAA
GTTGCGAGCAGAATTGTTTTTAGAAGTGATAGCTTCTAGTGATAGTTTCTTTTGCCGCGT
TGAGTATTTTTTGTTCGGGGAAATCTTATTGGTTTGCGTCACCGACGCGTAATAGCAAGT
ATATCTGTAGCTATACCGGTGACGTATTGTGCAAAATTCATGCTGTGTATAATCTTTACA
AGTAAAATTGAATGGATTTAGTAAAAAAATATTGTATATTAATTGTTATTACAATCAAAT
TGTATATTTAATCATGATTCTTGTACAGCACGTAATAGGTATATTTGAATAATAATAAAA
GCCATATAAATATGTGTATAATAGTTGTGAAAACCAGATTGATTAAACCTAAACCGCATT
ACTGCTTACTTAATATACCACCAGTAATAACGCATATGAAATTTTTTTTGTCCGTTTTTA
TTTTAATGCACGATGTTATTCCTTTATCCACCCATCTAAGCAATAAATATAAACTAACCA
CATCCATTTTCTTTAACTAAGGTCATAAGTATTTGTTTTTTAGTGTGTGTAGAAAAAGCT
TTTGAGACCTGCAGTTTGCAATAGATCAGAACAGATTTAATACAAGATAATGGTAAGTAC
AACCATAAGTCCTAGGCTAAACTTCAAATATACTTAAGGTGACTACATAGTATATTGCTT
TCATGACACCGAACTTACAAGTTCTACCATAGTTCATCCCGTTCTAGCACACATTACAGA
AATACAGGATTCTTTTGTTGCAAAAACAGCATACATAAAATATCATGAAAGGTGTACTTA
GTTATTTTAAATCCTACTTAAGAATTACTTTATTTAAATTTACAGTCAATAATCTTATCT
ACATTTTTATTTTAATTAATATTAGGTCAACTTTTATTTCTTTTATTTAAGAGGCAGAAG
GTGATAGAACTTGTGTAACTCCACTTGTATCTAAAGACATTCTACTGGATCCTACATGTA
AAACATCGTCTTCGTCTAGCAGCTCTCTCATCCGACGCTTGTAAATCTCACTGTCAGGGT
TATTTTCTTGGTTCCGACATTTGTCTAATTTCTTCTCTATAAGCCGTACTCGTTCTCTAG
CTGGTGCCTCTACCATTTTTACTAATGATCGAATCTTTCTTACAGCTTCAATAAGTATCG
CCAATTTATCACGTCCCGCATCTCTGAAGAGTATGTCTGTCACGTAGCTATCCAAGTTCT
CTTGTTCCTTGCTCGCTGCATGGAGTACTGCAGCTAAAGCAATTTGTGACGGAGCATACA
ACAAGCATGCATCAGTTAAGAACACCTTTTCTAGGAACTCATCAATACCACTACGAAGAC
GTTCAGGATTAGCCAATGAACATCTAGTTTTAATGTCTATTAGGAATCCTTCTACTGGTC
TGAAAGGATTATGTATGGTCAAATGGTAGTTTAATTGTTGCATTAGCAATAATTCATTGT
TTAGTATTATATCTGATGCTTTTTCTCGATCTCCTTTGATATTGGCGACGAATTGCCCGA
TAGAAACGTTAAATTCTTCAACTTTACACGCTAAATACACGCAAGTGGCTAAAATTTCTT
TTGGATGATAGTCCATTGTCGAGTTGTATAGATAAAATCGTTTAAAGTAATGAAAGGCTG
TGCCCACCACCCCTTTGGGCATTGGAGGTGTGAATCTCTTGCAGAATTCTTTCAGATGGA
GTTCGTATTGCTTTAAAAGTTGTCGTTCTTCATCAGGAGACAAGAAATACGTGAAACGTT
GTTGCTCGTCGATGTGCGAGTTCTGTCTCGCGTAAAAAAAATAATTGTGTTTTTCACGTA
AGCGTGCGAGTTCATTTTCATCACTGAACGTCCAAAATTTTCTTTGAGAGCTGGTAGAAA
ACATATTTTACTTGGAAACTAAAAGCGGATTGTAAAATCTTCAAATTCAG
(2990 bp)

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